COG2207


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2207, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 93 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description AraC-type DNA-binding domain and AraC-containing proteins
Function(s) descr. Transcription (K)

Occurence in the database

COG2207 is associated with 93 different proteins (see tab "Protein list" and "Profile")
The 93 proteins are classified into 15 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1144 FBDBKF_06550 150409 151329 1 robA MDR efflux pump AcrAB transcriptional activator RobA Morganella morganii S1
1 group_2704 FBDBKF_06570 153541 154398 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
2 group_2748 FBDBKF_07625 36349 37383 1 eutR HTH-type transcriptional regulator EutR Morganella morganii S1
3 group_304 FBDBKF_08065 151153 151938 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
4 group_1462 FBDBKF_09355 102949 103581 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
5 group_1525 FBDBKF_09850 67169 67933 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
6 group_1647 FBDBKF_10940 13276 14100 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
7 group_34 FBDBKF_13325 43161 43529 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
8 group_1919 FBDBKF_14280 55590 56366 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
9 group_406 FBDBKF_16410 6960 7343 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
10 group_2991 FBDBKF_17200 22313 23212 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
11 group_419 FBDBKF_18920 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
12 group_419 FBDBKF_20455 121 537 -1 tetD Transposon Tn10 TetD protein Morganella morganii S1
13 group_2991 EHELCC_01690 332289 333188 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
14 group_1525 EHELCC_04650 259134 259898 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
15 group_1647 EHELCC_05285 45368 46192 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
16 group_1919 EHELCC_08000 60619 61395 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
17 group_406 EHELCC_08275 123946 124329 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
18 group_34 EHELCC_08770 231662 232030 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
19 group_1144 EHELCC_09595 150981 151901 1 robA MDR efflux pump AcrAB transcriptional activator RobA Morganella morganii S2
20 group_2704 EHELCC_09615 154113 154970 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
21 group_1462 EHELCC_10055 42523 43155 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
22 group_2748 EHELCC_13455 10543 11577 1 eutR HTH-type transcriptional regulator EutR Morganella morganii S2
23 group_304 EHELCC_13895 125347 126132 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
24 group_419 EHELCC_18665 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
25 group_2991 NLDBIP_01770 346948 347847 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
26 group_1525 NLDBIP_04650 258930 259694 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
27 group_1647 NLDBIP_05605 86433 87257 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
28 group_1919 NLDBIP_08325 60619 61395 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
29 group_406 NLDBIP_08600 123946 124329 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
30 group_34 NLDBIP_09095 231662 232030 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
31 group_1144 NLDBIP_09975 150981 151901 1 robA MDR efflux pump AcrAB transcriptional activator RobA Morganella morganii S4
32 group_2704 NLDBIP_09995 154113 154970 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
33 group_1462 NLDBIP_10400 20794 21426 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
34 group_2748 NLDBIP_13900 31418 32452 1 eutR HTH-type transcriptional regulator EutR Morganella morganii S4
35 group_304 NLDBIP_14340 146222 147007 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
36 group_419 NLDBIP_18640 24325 25263 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
37 group_2991 LHKJJB_00265 44838 45737 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
38 group_1647 LHKJJB_02485 63957 64781 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
39 group_34 LHKJJB_05170 25129 25497 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
40 group_406 LHKJJB_05665 132830 133213 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
41 group_1919 LHKJJB_05940 195764 196540 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
42 group_2704 LHKJJB_07760 62268 63125 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
43 group_1144 LHKJJB_07780 65337 66257 -1 robA MDR efflux pump AcrAB transcriptional activator RobA Morganella morganii S3
44 group_304 LHKJJB_08510 12742 13527 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
45 group_2748 LHKJJB_08950 127297 128331 -1 eutR HTH-type transcriptional regulator EutR Morganella morganii S3
46 group_1462 LHKJJB_10955 170102 170734 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
47 group_1525 LHKJJB_13980 75684 76448 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
48 group_419 LHKJJB_18535 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
49 group_2991 HKOGLL_00305 50349 51248 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
50 group_1919 HKOGLL_04975 45210 45986 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
51 group_406 HKOGLL_05250 108537 108920 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
52 group_34 HKOGLL_05745 216253 216621 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
53 group_2704 HKOGLL_07310 62268 63125 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
54 group_1144 HKOGLL_07330 65337 66257 -1 robA MDR efflux pump AcrAB transcriptional activator RobA Morganella morganii S5
55 group_304 HKOGLL_08060 12742 13527 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
56 group_2748 HKOGLL_08500 127297 128331 -1 eutR HTH-type transcriptional regulator EutR Morganella morganii S5
57 group_1525 HKOGLL_12555 67950 68714 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
58 group_1462 HKOGLL_14015 103403 104035 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
59 group_1647 HKOGLL_15865 87397 88221 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
60 group_419 HKOGLL_18270 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
61 group_1525 F4V73_RS00495 104430 105194 1 helix-turn-helix transcriptional regulator Morganella psychrotolerans
62 group_2329 F4V73_RS01695 372336 373250 -1 helix-turn-helix domain-containing protein Morganella psychrotolerans
63 group_34 F4V73_RS01705 374294 375187 -1 AraC family transcriptional regulator Morganella psychrotolerans
64 group_1919 F4V73_RS02630 554112 554885 1 helix-turn-helix transcriptional regulator Morganella psychrotolerans
65 group_406 F4V73_RS02930 622208 622591 -1 helix-turn-helix domain-containing protein Morganella psychrotolerans
66 group_34 F4V73_RS03430 731923 732291 -1 helix-turn-helix domain-containing protein Morganella psychrotolerans
67 group_34 F4V73_RS04165 878917 879759 1 AraC family transcriptional regulator Morganella psychrotolerans
68 group_34 F4V73_RS04870 1035579 1036391 1 AraC family transcriptional regulator Morganella psychrotolerans
69 group_2576 F4V73_RS05265 1120695 1121543 1 AraC family transcriptional regulator Morganella psychrotolerans
70 group_2991 F4V73_RS05955 1266469 1267401 1 AraC family transcriptional regulator Morganella psychrotolerans
71 group_1647 F4V73_RS08355 1730493 1731317 1 AraC family transcriptional regulator Morganella psychrotolerans
72 group_1462 F4V73_RS10610 251829 252245 1 AraC family transcriptional regulator Morganella psychrotolerans
73 group_304 F4V73_RS12515 94575 95351 -1 helix-turn-helix transcriptional regulator Morganella psychrotolerans
74 group_34 F4V73_RS12525 96763 97122 1 AraC family transcriptional regulator Morganella psychrotolerans
75 group_304 F4V73_RS12930 193914 194699 1 helix-turn-helix transcriptional regulator Morganella psychrotolerans
76 group_2748 F4V73_RS13495 333383 334414 -1 eutR HTH-type transcriptional regulator EutR Morganella psychrotolerans
77 group_419 F4V73_RS13825 399088 400026 1 helix-turn-helix domain-containing protein Morganella psychrotolerans
78 group_1144 F4V73_RS15385 62093 63007 -1 robA MDR efflux pump AcrAB transcriptional activator RobA Morganella psychrotolerans
79 group_34 F4V73_RS17025 29565 29939 1 helix-turn-helix domain-containing protein Morganella psychrotolerans
80 group_1525 PMI_RS02770 607523 608284 1 helix-turn-helix transcriptional regulator Proteus mirabilis HI4320
81 group_2329 PMI_RS03950 890400 891296 -1 AraC family transcriptional regulator Proteus mirabilis HI4320
82 group_34 PMI_RS04495 1000488 1001414 1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
83 group_498 PMI_RS05015 1096170 1096856 1 AraC family transcriptional regulator Proteus mirabilis HI4320
84 group_34 PMI_RS05115 1116915 1117283 -1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
85 group_419 PMI_RS19730 1237353 1238267 -1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
86 group_2704 PMI_RS06035 1322515 1323360 1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
87 group_406 PMI_RS07795 1706994 1707380 1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
88 group_1919 PMI_RS08790 1922171 1922956 -1 helix-turn-helix transcriptional regulator Proteus mirabilis HI4320
89 group_1647 PMI_RS09670 2109559 2110395 1 AraC family transcriptional regulator Proteus mirabilis HI4320
90 group_34 PMI_RS14600 3236648 3237496 -1 chbR transcriptional regulator ChbR Proteus mirabilis HI4320
91 group_304 PMI_RS14650 3246053 3246823 -1 helix-turn-helix transcriptional regulator Proteus mirabilis HI4320
92 group_34 PMI_RS18315 4022520 4023335 -1 AraC family transcriptional regulator Proteus mirabilis HI4320