Orthogroup:group_4812


Homologs in group_4812

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS17025 F4V73_RS17025 Morganella psychrotolerans - helix-turn-helix domain-containing protein

Distribution of group_4812 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4812

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4812.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1

Product

# Product Occurence
1 helix-turn-helix domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2207 1 K Transcription (K) AraC-type DNA-binding domain and AraC-containing proteins

Pfam domain Annotation(s)

Domain ID Occurences Description
PF12833 1 Helix-turn-helix domain

Annotations of the 144 SwissProt hits

Annotation Number of occurrences
Bifunctional transcriptional activator/DNA repair enzyme AdaA 1
F1 operon positive regulatory protein 1
HTH-type transcriptional activator AarP 1
HTH-type transcriptional activator Btr 1
HTH-type transcriptional activator RhaR 13
HTH-type transcriptional activator RhaS 59
HTH-type transcriptional regulator AlkR 1
HTH-type transcriptional regulator ArgR 1
HTH-type transcriptional regulator ExsA 1
HTH-type transcriptional regulator GbdR 2
HTH-type transcriptional regulator GlxA 1
HTH-type transcriptional regulator MtrA 1
HTH-type transcriptional regulator Rv1931c 1
Lactose operon transcription activator 1
Melibiose operon regulatory protein 2
MmsAB operon regulatory protein 1
Msm operon regulatory protein 1
Multiple antibiotic resistance protein MarA 6
Probable HTH-type transcriptional regulator STM3175 1
Probable transcription factor PqrA 1
Probable transcriptional regulator LumQ 1
Putative AraC-like transcription regulator 2
Putative HTH-type transcriptional regulator YkgA 1
Regulatory protein PocR 1
Regulatory protein SoxS 4
Right origin-binding protein 3
Thermoregulatory protein LcrF 1
Transcriptional activator FeaR 1
Transcriptional activator RamA 2
Transcriptional regulator RamA 2
Transcriptional regulator Rob 1
Transcriptional regulatory protein HptR 8
Transposon Tn10 TetD protein 1
Uncharacterized HTH-type transcriptional regulator 1
Uncharacterized HTH-type transcriptional regulator HI_1052 1
Uncharacterized HTH-type transcriptional regulator MW0077 1
Uncharacterized HTH-type transcriptional regulator SA0097 1
Uncharacterized HTH-type transcriptional regulator SACOL0084 1
Uncharacterized HTH-type transcriptional regulator SAR0107 1
Uncharacterized HTH-type transcriptional regulator SAS0078 1
Uncharacterized HTH-type transcriptional regulator SAV0101 1
Uncharacterized HTH-type transcriptional regulator YbfI 1
Uncharacterized HTH-type transcriptional regulator YbfP 1
Uncharacterized HTH-type transcriptional regulator YdeE 1
Uncharacterized HTH-type transcriptional regulator YfiF 1
Uncharacterized HTH-type transcriptional regulator YpdC 1
Uncharacterized HTH-type transcriptional regulator YqhC 1
Uncharacterized HTH-type transcriptional regulator YtdP 1
Uncharacterized response regulatory protein SERP2406 1
Uncharacterized response regulatory protein SE_0165 1
Virulence regulon transcriptional activator VirF 2