Orthogroup:group_274


Homologs in group_274

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05700 FBDBKF_05700 Morganella morganii S1 rnt ribonuclease T
EHELCC_11890 EHELCC_11890 Morganella morganii S2 rnt ribonuclease T
NLDBIP_12230 NLDBIP_12230 Morganella morganii S4 rnt ribonuclease T
LHKJJB_12090 LHKJJB_12090 Morganella morganii S3 rnt ribonuclease T
HKOGLL_10705 HKOGLL_10705 Morganella morganii S5 rnt ribonuclease T
F4V73_RS03605 F4V73_RS03605 Morganella psychrotolerans rnt ribonuclease T
F4V73_RS17870 F4V73_RS17870 Morganella psychrotolerans - 3'-5' exonuclease
PMI_RS06730 PMI_RS06730 Proteus mirabilis HI4320 rnt ribonuclease T

Distribution of group_274 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_274 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_274

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_274.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rnt 7
2 - 1

Product

# Product Occurence
1 ribonuclease T 7
2 3'-5' exonuclease 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0847 8 L Replication, recombination and repair (L) DNA polymerase III, epsilon subunit or related 3'-5' exonuclease

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03683 7 ribonuclease T [EC:3.1.13.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00929 8 Exonuclease

Annotations of the 131 SwissProt hits

Annotation Number of occurrences
3'-5' exonuclease DinG 1
DNA polymerase III PolC-type 37
DNA polymerase III subunit epsilon 10
Ribonuclease T 80
Ribonuclease T (Fragment) 1
Three prime repair exonuclease 2 2

Protein length

Min length 203
Max length 215
Mean length (sd) 212.9 (4.2)
Median length 215.0

Protein length distribution