Orthogroup:group_401


Homologs in group_401

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13325 FBDBKF_13325 Morganella morganii S1 araC AraC-type DNA-binding domain and AraC-containing proteins
EHELCC_08770 EHELCC_08770 Morganella morganii S2 araC AraC-type DNA-binding domain and AraC-containing proteins
NLDBIP_09095 NLDBIP_09095 Morganella morganii S4 araC AraC-type DNA-binding domain and AraC-containing proteins
LHKJJB_05170 LHKJJB_05170 Morganella morganii S3 araC AraC-type DNA-binding domain and AraC-containing proteins
HKOGLL_05745 HKOGLL_05745 Morganella morganii S5 araC AraC-type DNA-binding domain and AraC-containing proteins
F4V73_RS03430 F4V73_RS03430 Morganella psychrotolerans - helix-turn-helix domain-containing protein
PMI_RS05115 PMI_RS05115 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein

Distribution of group_401 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_401 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_401

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_401.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 araC 5
2 - 2

Product

# Product Occurence
1 AraC-type DNA-binding domain and AraC-containing proteins 5
2 helix-turn-helix domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2207 7 K Transcription (K) AraC-type DNA-binding domain and AraC-containing proteins

Pfam domain Annotation(s)

Domain ID Occurences Description
PF12833 7 Helix-turn-helix domain

Annotations of the 183 SwissProt hits

Annotation Number of occurrences
Arabinose operon regulatory protein 3
Bifunctional transcriptional activator/DNA repair enzyme AdaA 1
F1 operon positive regulatory protein 1
HTH-type transcriptional activator AarP 1
HTH-type transcriptional activator Btr 1
HTH-type transcriptional activator RhaR 41
HTH-type transcriptional activator RhaS 56
HTH-type transcriptional regulator AlkR 1
HTH-type transcriptional regulator ArgR 1
HTH-type transcriptional regulator CdhR 1
HTH-type transcriptional regulator ChbR 1
HTH-type transcriptional regulator ExsA 1
HTH-type transcriptional regulator GbdR 2
HTH-type transcriptional regulator GlxA 1
HTH-type transcriptional regulator MtrA 1
HTH-type transcriptional regulator RipA 3
HTH-type transcriptional regulator Rv1931c 1
HTH-type transcriptional regulator YesS 1
Histidine kinase P4 1
Lactose operon transcription activator 1
Melibiose operon regulatory protein 2
Msm operon regulatory protein 1
Multiple antibiotic resistance protein MarA 6
Probable HTH-type transcriptional regulator STM3175 1
Probable transcription factor PqrA 1
Putative AraC-like transcription regulator 1
Putative HTH-type transcriptional regulator YkgA 1
RCS-specific HTH-type transcriptional activator RclR 1
Regulatory protein PocR 1
Regulatory protein Rns 1
Regulatory protein SoxS 4
Right origin-binding protein 3
Thermoregulatory protein LcrF 1
Transcriptional activator AggR 1
Transcriptional activator FeaR 1
Transcriptional activator NphR 1
Transcriptional activator PerA 1
Transcriptional activator RamA 2
Transcriptional regulator HilD 2
Transcriptional regulator RamA 2
Transcriptional regulator Rob 1
Transposon Tn10 TetD protein 1
Uncharacterized HTH-type transcriptional regulator 1
Uncharacterized HTH-type transcriptional regulator HI_1052 1
Uncharacterized HTH-type transcriptional regulator MW0077 1
Uncharacterized HTH-type transcriptional regulator SA0097 1
Uncharacterized HTH-type transcriptional regulator SACOL0084 1
Uncharacterized HTH-type transcriptional regulator SAR0107 1
Uncharacterized HTH-type transcriptional regulator SAS0078 1
Uncharacterized HTH-type transcriptional regulator SAV0101 1
Uncharacterized HTH-type transcriptional regulator YbfI 1
Uncharacterized HTH-type transcriptional regulator YbfP 1
Uncharacterized HTH-type transcriptional regulator YdeE 1
Uncharacterized HTH-type transcriptional regulator YfiF 1
Uncharacterized HTH-type transcriptional regulator YijO 1
Uncharacterized HTH-type transcriptional regulator YpdC 1
Uncharacterized HTH-type transcriptional regulator YqhC 1
Uncharacterized HTH-type transcriptional regulator YtdP 1
Uncharacterized HTH-type transcriptional regulator in cgkA 5'region (Fragment) 1
Uncharacterized transcriptional regulatory protein YesN 1
Urease operon transcriptional activator 1
Virulence regulon transcriptional activator VirF 2
XylDLEGF operon transcriptional activator 1
XylDLEGF operon transcriptional activator 1 1
Xylose operon regulatory protein 4

Protein length

Unique protein length 122

Protein length distribution