Orthogroup:group_196


Homologs in group_196

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11765 FBDBKF_11765 Morganella morganii S1 yheO putative transcriptional regulator YheO, contains PAS and DNA-binding HTH domains
EHELCC_14540 EHELCC_14540 Morganella morganii S2 yheO putative transcriptional regulator YheO, contains PAS and DNA-binding HTH domains
NLDBIP_15635 NLDBIP_15635 Morganella morganii S4 yheO putative transcriptional regulator YheO, contains PAS and DNA-binding HTH domains
LHKJJB_14975 LHKJJB_14975 Morganella morganii S3 yheO putative transcriptional regulator YheO, contains PAS and DNA-binding HTH domains
HKOGLL_19310 HKOGLL_19310 Morganella morganii S5 yheO putative transcriptional regulator YheO, contains PAS and DNA-binding HTH domains
F4V73_RS14890 F4V73_RS14890 Morganella psychrotolerans - transcriptional regulator
PMI_RS00745 PMI_RS00745 Proteus mirabilis HI4320 - PAS domain-containing protein
PMI_RS13825 PMI_RS13825 Proteus mirabilis HI4320 - transcriptional regulator
PMI_RS17060 PMI_RS17060 Proteus mirabilis HI4320 - PAS domain-containing protein

Distribution of group_196 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_196 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_196

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_196.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yheO 5
2 - 4

Product

# Product Occurence
1 putative transcriptional regulator YheO, contains PAS and DNA-binding HTH domains 5
2 transcriptional regulator 2
3 PAS domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2964 9 K Transcription (K) Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08348 9 YheO-like PAS domain
PF13309 9 HTH domain

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Transcriptional regulator DauR 1
Uncharacterized protein HI_0575 1
Uncharacterized protein YheO 3

Protein length

Min length 210
Max length 234
Mean length (sd) 228.7 (9.0)
Median length 233.0

Protein length distribution