COG0745
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0745, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 70 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain |
---|---|
Function(s) descr. | Signal transduction mechanisms (T) Transcription (K) |
Occurence in the database
COG0745 is associated with 70 different proteins (see tab "Protein list" and "Profile") |
The 70 proteins are classified into 10 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_241 | FBDBKF_02140 | 117736 | 118404 | 1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S1 |
1 | group_760 | FBDBKF_03420 | 88437 | 89120 | -1 | kdpE | two-component system response regulator KdpE | Morganella morganii S1 |
2 | group_2684 | FBDBKF_05205 | 48035 | 48706 | 1 | qseB | quorum sensing response regulator transcription factor QseB | Morganella morganii S1 |
3 | group_1142 | FBDBKF_06540 | 148911 | 149627 | 1 | arcA | two-component system response regulator ArcA | Morganella morganii S1 |
4 | group_1631 | FBDBKF_10740 | 116092 | 116811 | 1 | ompR | two-component system response regulator OmpR | Morganella morganii S1 |
5 | group_1772 | FBDBKF_12330 | 129444 | 130148 | 1 | cpxR | envelope stress response regulator transcription factor CpxR | Morganella morganii S1 |
6 | group_1943 | FBDBKF_14575 | 9613 | 10287 | 1 | phoP | two-component system response regulator PhoP | Morganella morganii S1 |
7 | group_2187 | FBDBKF_16470 | 17362 | 18081 | -1 | baeR | two-component system response regulator BaeR | Morganella morganii S1 |
8 | group_2237 | FBDBKF_17135 | 12218 | 12883 | 1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S1 |
9 | group_2267 | FBDBKF_17435 | 18631 | 19320 | -1 | phoB | phosphate regulon transcriptional regulator PhoB | Morganella morganii S1 |
10 | group_2237 | EHELCC_01755 | 342618 | 343283 | -1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S2 |
11 | group_241 | EHELCC_02610 | 505556 | 506224 | 1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S2 |
12 | group_760 | EHELCC_07115 | 157983 | 158666 | 1 | kdpE | two-component system response regulator KdpE | Morganella morganii S2 |
13 | group_2187 | EHELCC_08335 | 134348 | 135067 | -1 | baeR | two-component system response regulator BaeR | Morganella morganii S2 |
14 | group_1142 | EHELCC_09585 | 149483 | 150199 | 1 | arcA | two-component system response regulator ArcA | Morganella morganii S2 |
15 | group_2684 | EHELCC_12385 | 132788 | 133459 | -1 | qseB | quorum sensing response regulator transcription factor QseB | Morganella morganii S2 |
16 | group_1772 | EHELCC_13975 | 4557 | 5261 | -1 | cpxR | envelope stress response regulator transcription factor CpxR | Morganella morganii S2 |
17 | group_1631 | EHELCC_15075 | 116082 | 116801 | 1 | ompR | two-component system response regulator OmpR | Morganella morganii S2 |
18 | group_1943 | EHELCC_15380 | 39689 | 40363 | 1 | phoP | two-component system response regulator PhoP | Morganella morganii S2 |
19 | group_2267 | EHELCC_17330 | 18631 | 19320 | -1 | phoB | phosphate regulon transcriptional regulator PhoB | Morganella morganii S2 |
20 | group_241 | NLDBIP_00850 | 173912 | 174580 | -1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S4 |
21 | group_2237 | NLDBIP_01705 | 336853 | 337518 | 1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S4 |
22 | group_760 | NLDBIP_07440 | 157856 | 158539 | 1 | kdpE | two-component system response regulator KdpE | Morganella morganii S4 |
23 | group_2187 | NLDBIP_08660 | 134348 | 135067 | -1 | baeR | two-component system response regulator BaeR | Morganella morganii S4 |
24 | group_1142 | NLDBIP_09965 | 149483 | 150199 | 1 | arcA | two-component system response regulator ArcA | Morganella morganii S4 |
25 | group_2684 | NLDBIP_12725 | 132743 | 133414 | -1 | qseB | quorum sensing response regulator transcription factor QseB | Morganella morganii S4 |
26 | group_1631 | NLDBIP_14905 | 116082 | 116801 | 1 | ompR | two-component system response regulator OmpR | Morganella morganii S4 |
27 | group_1772 | NLDBIP_15070 | 8494 | 9198 | -1 | cpxR | envelope stress response regulator transcription factor CpxR | Morganella morganii S4 |
28 | group_1943 | NLDBIP_15910 | 39689 | 40363 | 1 | phoP | two-component system response regulator PhoP | Morganella morganii S4 |
29 | group_2267 | NLDBIP_17865 | 23476 | 24165 | 1 | phoB | phosphate regulon transcriptional regulator PhoB | Morganella morganii S4 |
30 | group_2237 | LHKJJB_00330 | 55167 | 55832 | -1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S3 |
31 | group_241 | LHKJJB_01185 | 218105 | 218773 | 1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S3 |
32 | group_2187 | LHKJJB_05605 | 122092 | 122811 | 1 | baeR | two-component system response regulator BaeR | Morganella morganii S3 |
33 | group_760 | LHKJJB_06975 | 121602 | 122285 | 1 | kdpE | two-component system response regulator KdpE | Morganella morganii S3 |
34 | group_1142 | LHKJJB_07790 | 67039 | 67755 | -1 | arcA | two-component system response regulator ArcA | Morganella morganii S3 |
35 | group_2684 | LHKJJB_12585 | 132788 | 133459 | -1 | qseB | quorum sensing response regulator transcription factor QseB | Morganella morganii S3 |
36 | group_1631 | LHKJJB_14440 | 24925 | 25644 | -1 | ompR | two-component system response regulator OmpR | Morganella morganii S3 |
37 | group_1772 | LHKJJB_15540 | 129444 | 130148 | 1 | cpxR | envelope stress response regulator transcription factor CpxR | Morganella morganii S3 |
38 | group_1943 | LHKJJB_15930 | 76323 | 76997 | -1 | phoP | two-component system response regulator PhoP | Morganella morganii S3 |
39 | group_2267 | LHKJJB_17785 | 23474 | 24163 | 1 | phoB | phosphate regulon transcriptional regulator PhoB | Morganella morganii S3 |
40 | group_2237 | HKOGLL_00370 | 60678 | 61343 | -1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S5 |
41 | group_241 | HKOGLL_01225 | 223616 | 224284 | 1 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | Morganella morganii S5 |
42 | group_760 | HKOGLL_03955 | 111102 | 111785 | -1 | kdpE | two-component system response regulator KdpE | Morganella morganii S5 |
43 | group_2187 | HKOGLL_05310 | 118939 | 119658 | -1 | baeR | two-component system response regulator BaeR | Morganella morganii S5 |
44 | group_1142 | HKOGLL_07340 | 67039 | 67755 | -1 | arcA | two-component system response regulator ArcA | Morganella morganii S5 |
45 | group_2684 | HKOGLL_11200 | 132788 | 133459 | -1 | qseB | quorum sensing response regulator transcription factor QseB | Morganella morganii S5 |
46 | group_1631 | HKOGLL_13060 | 24925 | 25644 | -1 | ompR | two-component system response regulator OmpR | Morganella morganii S5 |
47 | group_1772 | HKOGLL_14660 | 116107 | 116811 | 1 | cpxR | envelope stress response regulator transcription factor CpxR | Morganella morganii S5 |
48 | group_1943 | HKOGLL_15050 | 75535 | 76209 | -1 | phoP | two-component system response regulator PhoP | Morganella morganii S5 |
49 | group_2267 | HKOGLL_17795 | 23474 | 24163 | 1 | phoB | phosphate regulon transcriptional regulator PhoB | Morganella morganii S5 |
50 | group_2187 | F4V73_RS02985 | 633283 | 634002 | -1 | baeR | two-component system response regulator BaeR | Morganella psychrotolerans |
51 | group_241 | F4V73_RS03915 | 829720 | 830406 | -1 | copper/silver response regulator transcription factor | Morganella psychrotolerans | |
52 | group_241 | F4V73_RS04490 | 950185 | 950856 | 1 | hprR | response regulator transcription factor HprR | Morganella psychrotolerans |
53 | group_2684 | F4V73_RS05665 | 1204348 | 1205019 | 1 | qseB | quorum sensing response regulator transcription factor QseB | Morganella psychrotolerans |
54 | group_2237 | F4V73_RS05895 | 1256716 | 1257381 | 1 | response regulator transcription factor | Morganella psychrotolerans | |
55 | group_1943 | F4V73_RS07370 | 1537853 | 1538527 | 1 | phoP | two-component system response regulator PhoP | Morganella psychrotolerans |
56 | group_241 | F4V73_RS10180 | 146869 | 147552 | -1 | response regulator transcription factor | Morganella psychrotolerans | |
57 | group_760 | F4V73_RS11480 | 441007 | 441690 | 1 | kdpE | two-component system response regulator KdpE | Morganella psychrotolerans |
58 | group_1631 | F4V73_RS14455 | 119882 | 120604 | 1 | ompR | two-component system response regulator OmpR | Morganella psychrotolerans |
59 | group_1142 | F4V73_RS15395 | 63935 | 64651 | -1 | arcA | two-component system response regulator ArcA | Morganella psychrotolerans |
60 | group_2267 | F4V73_RS16610 | 142358 | 143047 | -1 | phoB | phosphate regulon transcriptional regulator PhoB | Morganella psychrotolerans |
61 | group_1772 | F4V73_RS17160 | 63901 | 64602 | 1 | cpxR | envelope stress response regulator transcription factor CpxR | Morganella psychrotolerans |
62 | group_2267 | PMI_RS00250 | 78944 | 79633 | 1 | phoB | phosphate regulon transcriptional regulator PhoB | Proteus mirabilis HI4320 |
63 | group_1943 | PMI_RS04350 | 977653 | 978327 | -1 | phoP | two-component system response regulator PhoP | Proteus mirabilis HI4320 |
64 | group_760 | PMI_RS05915 | 1298782 | 1299465 | -1 | kdpE | two-component system response regulator KdpE | Proteus mirabilis HI4320 |
65 | group_2187 | PMI_RS07750 | 1697128 | 1697835 | 1 | baeR | two-component system response regulator BaeR | Proteus mirabilis HI4320 |
66 | group_2237 | PMI_RS08300 | 1813416 | 1814081 | 1 | response regulator transcription factor | Proteus mirabilis HI4320 | |
67 | group_1631 | PMI_RS14290 | 3171999 | 3172721 | 1 | ompR | two-component system response regulator OmpR | Proteus mirabilis HI4320 |
68 | group_1772 | PMI_RS15820 | 3513754 | 3514452 | -1 | cpxR | envelope stress response regulator transcription factor CpxR | Proteus mirabilis HI4320 |
69 | group_1142 | PMI_RS18505 | 4062408 | 4063124 | -1 | arcA | two-component system response regulator ArcA | Proteus mirabilis HI4320 |