COG0789


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0789, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 55 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description DNA-binding transcriptional regulator, MerR family
Function(s) descr. Transcription (K)

Occurence in the database

COG0789 is associated with 55 different proteins (see tab "Protein list" and "Profile")
The 55 proteins are classified into 9 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2581 FBDBKF_02860 266614 267036 1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S1
1 group_2804 FBDBKF_09250 81615 82472 -1 bltR2 GyrI-like small molecule binding domain Morganella morganii S1
2 group_1784 FBDBKF_13010 106833 107249 -1 cueR Cu(I)-responsive transcriptional regulator Morganella morganii S1
3 group_2090 FBDBKF_15705 75391 75756 -1 merD mercury resistance co-regulator MerD Morganella morganii S1
4 group_3465 FBDBKF_15730 78377 78811 1 merR mercury resistance transcriptional regulator MerR Morganella morganii S1
5 group_3002 FBDBKF_17595 14669 15472 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S1
6 group_3045 FBDBKF_18185 3480 3848 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S1
7 group_2372 FBDBKF_19110 9140 9589 -1 zntR Zn(2+)-responsive transcriptional regulator Morganella morganii S1
8 group_2090 FBDBKF_20220 2390 2752 -1 merD mercury resistance co-regulator MerD Morganella morganii S1
9 group_2581 EHELCC_03330 654434 654856 1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S2
10 group_1784 EHELCC_06325 276865 277281 -1 cueR Cu(I)-responsive transcriptional regulator Morganella morganii S2
11 group_2804 EHELCC_10160 63632 64489 1 bltR2 GyrI-like small molecule binding domain Morganella morganii S2
12 group_2090 EHELCC_16060 74691 75056 -1 merD mercury resistance co-regulator MerD Morganella morganii S2
13 group_3465 EHELCC_16085 77677 78111 1 merR mercury resistance transcriptional regulator MerR Morganella morganii S2
14 group_3002 EHELCC_18080 14045 14848 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S2
15 group_3045 EHELCC_18220 3353 3721 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S2
16 group_2372 EHELCC_18855 9140 9589 -1 zntR Zn(2+)-responsive transcriptional regulator Morganella morganii S2
17 group_2090 EHELCC_19585 2390 2752 -1 merD mercury resistance co-regulator MerD Morganella morganii S2
18 group_2581 NLDBIP_00130 25280 25702 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S4
19 group_1784 NLDBIP_06645 317930 318346 -1 cueR Cu(I)-responsive transcriptional regulator Morganella morganii S4
20 group_2804 NLDBIP_10505 41903 42760 1 bltR2 GyrI-like small molecule binding domain Morganella morganii S4
21 group_3465 NLDBIP_16280 2552 2986 -1 merR mercury resistance transcriptional regulator MerR Morganella morganii S4
22 group_2090 NLDBIP_16305 5607 5972 1 merD mercury resistance co-regulator MerD Morganella morganii S4
23 group_3002 NLDBIP_18070 23889 24692 1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S4
24 group_3045 NLDBIP_18145 3554 3922 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S4
25 group_2372 NLDBIP_18870 9140 9589 -1 zntR Zn(2+)-responsive transcriptional regulator Morganella morganii S4
26 group_2581 LHKJJB_01905 366983 367405 1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S3
27 group_1784 LHKJJB_03525 295454 295870 -1 cueR Cu(I)-responsive transcriptional regulator Morganella morganii S3
28 group_2804 LHKJJB_10850 148768 149625 -1 bltR2 GyrI-like small molecule binding domain Morganella morganii S3
29 group_2090 LHKJJB_16495 74691 75056 -1 merD mercury resistance co-regulator MerD Morganella morganii S3
30 group_3465 LHKJJB_16520 77677 78111 1 merR mercury resistance transcriptional regulator MerR Morganella morganii S3
31 group_3002 LHKJJB_18265 23889 24692 1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S3
32 group_3045 LHKJJB_18340 3392 3760 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S3
33 group_2372 LHKJJB_18725 9140 9589 -1 zntR Zn(2+)-responsive transcriptional regulator Morganella morganii S3
34 group_2581 HKOGLL_01945 372494 372916 1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S5
35 group_1784 HKOGLL_07000 217318 217734 -1 cueR Cu(I)-responsive transcriptional regulator Morganella morganii S5
36 group_2804 HKOGLL_13910 82069 82926 -1 bltR2 GyrI-like small molecule binding domain Morganella morganii S5
37 group_2090 HKOGLL_16265 74691 75056 -1 merD mercury resistance co-regulator MerD Morganella morganii S5
38 group_3465 HKOGLL_16290 77677 78111 1 merR mercury resistance transcriptional regulator MerR Morganella morganii S5
39 group_3002 HKOGLL_17935 14045 14848 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S5
40 group_3045 HKOGLL_18075 3370 3738 -1 soxR DNA-binding transcriptional regulator, MerR family Morganella morganii S5
41 group_2372 HKOGLL_18460 9140 9589 -1 zntR Zn(2+)-responsive transcriptional regulator Morganella morganii S5
42 group_3045 F4V73_RS01730 383795 384163 -1 MerR family transcriptional regulator Morganella psychrotolerans
43 group_2581 F4V73_RS05300 1126491 1126913 1 MerR family transcriptional regulator Morganella psychrotolerans
44 group_2804 F4V73_RS10720 273644 274501 1 MerR family transcriptional regulator Morganella psychrotolerans
45 group_3002 F4V73_RS14975 233276 234079 -1 helix-turn-helix domain-containing protein Morganella psychrotolerans
46 group_1784 F4V73_RS16195 47226 47645 -1 cueR Cu(I)-responsive transcriptional regulator Morganella psychrotolerans
47 group_3648 F4V73_RS17005 24047 24493 -1 cueR Cu(I)-responsive transcriptional regulator Morganella psychrotolerans
48 group_3648 F4V73_RS17030 30175 30573 1 MerR family transcriptional regulator Morganella psychrotolerans
49 group_2372 F4V73_RS19055 20762 21199 1 zntR Zn(2+)-responsive transcriptional regulator Morganella psychrotolerans
50 group_3648 PMI_RS10150 2222564 2222971 1 cueR Cu(I)-responsive transcriptional regulator Proteus mirabilis HI4320
51 group_1784 PMI_RS10705 2352786 2353187 -1 cueR Cu(I)-responsive transcriptional regulator Proteus mirabilis HI4320
52 group_3648 PMI_RS13330 2954837 2955286 -1 soxR redox-sensitive transcriptional activator SoxR Proteus mirabilis HI4320
53 group_2372 PMI_RS16280 3596328 3596741 1 zntR Zn(2+)-responsive transcriptional regulator Proteus mirabilis HI4320
54 group_3648 PMI_RS18275 4007785 4008810 -1 MerR family transcriptional regulator Proteus mirabilis HI4320