Orthogroup:group_2606



Homologs in group_2606

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03470 FBDBKF_03470 Morganella morganii S1 livM ABC-type branched-chain amino acid transport system, permease component
EHELCC_07065 EHELCC_07065 Morganella morganii S2 livM ABC-type branched-chain amino acid transport system, permease component
NLDBIP_07390 NLDBIP_07390 Morganella morganii S4 livM ABC-type branched-chain amino acid transport system, permease component
LHKJJB_06925 LHKJJB_06925 Morganella morganii S3 livM ABC-type branched-chain amino acid transport system, permease component
HKOGLL_04005 HKOGLL_04005 Morganella morganii S5 livM ABC-type branched-chain amino acid transport system, permease component
F4V73_RS11425 F4V73_RS11425 Morganella psychrotolerans - high-affinity branched-chain amino acid ABC transporter permease LivM

Distribution of group_2606 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2606 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2606

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2606.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 livM 5
2 - 1

Product

# Product Occurence
1 ABC-type branched-chain amino acid transport system, permease component 5
2 high-affinity branched-chain amino acid ABC transporter permease LivM 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4177 6 E Amino acid transport and metabolism (E) ABC-type branched-chain amino acid transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01998 6 branched-chain amino acid transport system permease protein ABC transporters
Quorum sensing
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02653 6 Branched-chain amino acid transport system / permease component
PF11862 6 Domain of unknown function (DUF3382)

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Autoinducer 2 import system permease protein LsrC 4
High-affinity branched-chain amino acid transport system permease protein BraE 1
High-affinity branched-chain amino acid transport system permease protein LivM 2
Probable branched-chain amino acid transport permease protein LivM 1

Protein length

Unique protein length 427

Protein length distribution