Orthogroup:group_2405



Homologs in group_2405

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19275 FBDBKF_19275 Morganella morganii S1 hybB Ni/Fe-hydrogenase cytochrome b subunit
EHELCC_07560 EHELCC_07560 Morganella morganii S2 hybB Ni/Fe-hydrogenase cytochrome b subunit
NLDBIP_07885 NLDBIP_07885 Morganella morganii S4 hybB Ni/Fe-hydrogenase cytochrome b subunit
LHKJJB_07420 LHKJJB_07420 Morganella morganii S3 hybB Ni/Fe-hydrogenase cytochrome b subunit
HKOGLL_03510 HKOGLL_03510 Morganella morganii S5 hybB Ni/Fe-hydrogenase cytochrome b subunit
F4V73_RS12035 F4V73_RS12035 Morganella psychrotolerans hybB Ni/Fe-hydrogenase cytochrome b subunit
PMI_RS00160 PMI_RS00160 Proteus mirabilis HI4320 hybB Ni/Fe-hydrogenase cytochrome b subunit

Distribution of group_2405 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2405 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2405

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2405.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hybB 7

Product

# Product Occurence
1 Ni/Fe-hydrogenase cytochrome b subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5557 7 C Energy production and conversion (C) Ni/Fe-hydrogenase 2 integral membrane subunit HybB

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03916 5 Polysulphide reductase, NrfD

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Menaquinone reductase, integral membrane subunit 1
Probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit 1
Protein DVU_0534 1

Protein length

Unique protein length 393

Protein length distribution