Orthogroup:group_2405


Homologs in group_2405

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19110 FBDBKF_19110 Morganella morganii S1 zntR Zn(2+)-responsive transcriptional regulator
EHELCC_18855 EHELCC_18855 Morganella morganii S2 zntR Zn(2+)-responsive transcriptional regulator
NLDBIP_18870 NLDBIP_18870 Morganella morganii S4 zntR Zn(2+)-responsive transcriptional regulator
LHKJJB_18725 LHKJJB_18725 Morganella morganii S3 zntR Zn(2+)-responsive transcriptional regulator
HKOGLL_18460 HKOGLL_18460 Morganella morganii S5 zntR Zn(2+)-responsive transcriptional regulator
F4V73_RS19055 F4V73_RS19055 Morganella psychrotolerans zntR Zn(2+)-responsive transcriptional regulator
PMI_RS16280 PMI_RS16280 Proteus mirabilis HI4320 zntR Zn(2+)-responsive transcriptional regulator

Distribution of group_2405 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2405 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2405

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2405.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 zntR 7

Product

# Product Occurence
1 Zn(2+)-responsive transcriptional regulator 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 7 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13638 7 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13411 7 MerR HTH family regulatory protein

Annotations of the 60 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator SoxR homolog 1
HTH-type transcriptional activator TipA 2
HTH-type transcriptional activator mta 1
HTH-type transcriptional regulator AdhR 1
HTH-type transcriptional regulator CueR 9
HTH-type transcriptional regulator GlnR 1
HTH-type transcriptional regulator HmrR 2
HTH-type transcriptional regulator MerD 6
HTH-type transcriptional regulator MlrA 3
HTH-type transcriptional regulator YfmP 1
HTH-type transcriptional regulator ZntR 2
HTH-type transcriptional regulator ZntR homolog 1
HTH-type transcriptional repressor BluR 1
HTH-type transcriptional repressor CarH 2
Heavy metal-dependent transcription regulator 1 1
Heavy metal-dependent transcription regulator 2 1
Mercuric resistance operon regulatory protein 8
Mercuric resistance operon regulatory protein (Fragment) 1
Multidrug-efflux transporter 2 regulator 1
Nodulation protein NolA 2
Nodulation protein NolA (Fragment) 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1
Redox-sensitive transcriptional activator SoxR 6
Uncharacterized HTH-type transcriptional regulator HI_0186 1
Uncharacterized HTH-type transcriptional regulator PA4778 1
Uncharacterized HTH-type transcriptional regulator YdfL 1
Uncharacterized HTH-type transcriptional regulator YyaN 1
Uncharacterized HTH-type transcriptional regulator slr0701 1

Protein length

Min length 137
Max length 149
Mean length (sd) 146.7 (4.5)
Median length 149.0

Protein length distribution