Orthogroup:group_3048


Homologs in group_3048

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18210 FBDBKF_18210 Morganella morganii S1 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
EHELCC_18245 EHELCC_18245 Morganella morganii S2 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
NLDBIP_18170 NLDBIP_18170 Morganella morganii S4 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
LHKJJB_18365 LHKJJB_18365 Morganella morganii S3 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
HKOGLL_18100 HKOGLL_18100 Morganella morganii S5 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
PMI_RS15425 PMI_RS15425 Proteus mirabilis HI4320 - nitrilase family protein

Distribution of group_3048 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3048 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3048

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3048.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nit2 5
2 - 1

Product

# Product Occurence
1 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate 5
2 nitrilase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0388 6 C Energy production and conversion (C) Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00795 6 Carbon-nitrogen hydrolase

Annotations of the 91 SwissProt hits

Annotation Number of occurrences
(R)-stereoselective amidase 1
2-oxoglutaramate amidase 1
Aliphatic amidase 7
Aliphatic nitrilase 2
Arylacetonitrilase 10
Beta-ureidopropionase 1
Bifunctional nitrilase/nitrile hydratase NIT4 2
Bifunctional nitrilase/nitrile hydratase NIT4A 2
Bifunctional nitrilase/nitrile hydratase NIT4B 1
Citrullinase 1
Cyanide hydratase 11
Deaminated glutathione amidase 1
Formamidase 7
Glutamine-dependent NAD(+) synthetase 4
Hydrolase C26A3.11 1
Hydrolase MT0498 1
Hydrolase Rv0480c 1
Hydrolase in agr operon 1
Hydrolase in agr operon (Fragment) 1
Hydrolase in pqqF 5'region 1
N-carbamoyl-D-amino acid hydrolase 3
N-carbamoylputrescine amidase 4
Nitrilase 6
Nitrilase 1 1
Nitrilase 2 1
Nitrilase 3 1
Nitrilase and fragile histidine triad fusion protein NitFhit 1
Nitrilase blr3397 1
Nitrilase homolog 2 1
Omega-amidase NIT2 7
Omega-amidase NIT2-A 1
Omega-amidase NIT2-B 1
Omega-amidase NIT3 1
Omega-amidase YafV 1
Omega-amidase, chloroplastic 1
Probable hydrolase YhcX 1
Probable nitrilase C965.09 1
Putative nitrilase-like protein NIT1 1

Protein length

Min length 323
Max length 338
Mean length (sd) 335.5 (6.1)
Median length 338.0

Protein length distribution