Orthogroup:group_3465


Homologs in group_3465

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15730 FBDBKF_15730 Morganella morganii S1 merR mercury resistance transcriptional regulator MerR
EHELCC_16085 EHELCC_16085 Morganella morganii S2 merR mercury resistance transcriptional regulator MerR
NLDBIP_16280 NLDBIP_16280 Morganella morganii S4 merR mercury resistance transcriptional regulator MerR
LHKJJB_16520 LHKJJB_16520 Morganella morganii S3 merR mercury resistance transcriptional regulator MerR
HKOGLL_16290 HKOGLL_16290 Morganella morganii S5 merR mercury resistance transcriptional regulator MerR

Distribution of group_3465 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3465 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3465

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3465.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 merR 5

Product

# Product Occurence
1 mercury resistance transcriptional regulator MerR 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 5 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08365 5 MerR family transcriptional regulator, mercuric resistance operon regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00376 5 MerR family regulatory protein
PF09278 5 MerR, DNA binding

AMR gene Annotation(s)

Gene Occurences Description Scope Type Class Subclass HMM
merR 5 mercury resistance transcriptional regulator MerR plus STRESS MERCURY MERCURY NF010315 

Annotations of the 47 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator TipA 2
HTH-type transcriptional regulator AdhR 1
HTH-type transcriptional regulator CueR 9
HTH-type transcriptional regulator HmrR 2
HTH-type transcriptional regulator MerD 4
HTH-type transcriptional regulator YfmP 1
HTH-type transcriptional regulator ZntR 2
HTH-type transcriptional regulator ZntR homolog 1
Heavy metal-dependent transcription regulator 1 1
Heavy metal-dependent transcription regulator 2 1
Mercuric resistance operon regulatory protein 8
Mercuric resistance operon regulatory protein (Fragment) 1
Nodulation protein NolA 2
Nodulation protein NolA (Fragment) 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1
Redox-sensitive transcriptional activator SoxR 6
Uncharacterized HTH-type transcriptional regulator HI_0186 1
Uncharacterized HTH-type transcriptional regulator PA4778 1
Uncharacterized HTH-type transcriptional regulator YyaN 1
Uncharacterized HTH-type transcriptional regulator slr0701 1

Protein length

Unique protein length 144

Protein length distribution