Orthogroup:group_4124



Homologs in group_4124

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS13330 PMI_RS13330 Proteus mirabilis HI4320 soxR redox-sensitive transcriptional activator SoxR

Distribution of group_4124 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4124

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4124.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 soxR 1

Product

# Product Occurence
1 redox-sensitive transcriptional activator SoxR 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 1 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13639 1 MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00376 1 MerR family regulatory protein
PF09278 1 MerR, DNA binding

Annotations of the 37 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator SoxR homolog 1
HTH-type transcriptional activator TipA 2
HTH-type transcriptional activator mta 1
HTH-type transcriptional regulator CueR 7
HTH-type transcriptional regulator HmrR 2
HTH-type transcriptional regulator YfmP 1
HTH-type transcriptional regulator ZntR homolog 1
Heavy metal-dependent transcription regulator 2 1
Mercuric resistance operon regulatory protein 7
Mercuric resistance operon regulatory protein (Fragment) 1
Nodulation protein NolA 2
Nodulation protein NolA (Fragment) 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1
Redox-sensitive transcriptional activator SoxR 6
Uncharacterized HTH-type transcriptional regulator PA4778 1
Uncharacterized HTH-type transcriptional regulator YdfL 1
Uncharacterized HTH-type transcriptional regulator slr0701 1