PF00392

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00392
Protein list: lists the 66 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00392
Description Bacterial regulatory proteins, gntR family

Occurence in the database

PF00392 is associated with 66 different proteins
The 66 proteins are classified into 10 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_673 FBDBKF_01815 50742 52163 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S1
1 group_2571 FBDBKF_02480 190945 192282 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S1
2 group_161 FBDBKF_04245 37329 38093 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Morganella morganii S1
3 group_2680 FBDBKF_04470 87561 88982 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S1
4 group_1056 FBDBKF_05475 105660 106373 -1 fadR fatty acid metabolism transcriptional regulator FadR Morganella morganii S1
5 group_430 FBDBKF_07525 18616 19326 -1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S1
6 group_3291 FBDBKF_09170 63354 64091 -1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S1
7 group_2859 FBDBKF_10540 67043 67816 -1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S1
8 group_2092 FBDBKF_15380 1078 1764 1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S1
9 group_3101 FBDBKF_19595 3509 4996 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S1
10 group_673 EHELCC_02285 438562 439983 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S2
11 group_2571 EHELCC_02950 578765 580102 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S2
12 group_161 EHELCC_05535 96786 97550 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Morganella morganii S2
13 group_2680 EHELCC_05760 147018 148439 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S2
14 group_3291 EHELCC_10240 82013 82750 1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S2
15 group_1056 EHELCC_12115 75121 75834 1 fadR fatty acid metabolism transcriptional regulator FadR Morganella morganii S2
16 group_2859 EHELCC_14875 67033 67806 -1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S2
17 group_2092 EHELCC_15740 378 1064 1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S2
18 group_3101 EHELCC_16885 38736 40223 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S2
19 group_430 EHELCC_17195 46266 46976 -1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S2
20 group_2571 NLDBIP_00510 100034 101371 -1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S4
21 group_673 NLDBIP_01175 240153 241574 -1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S4
22 group_161 NLDBIP_05855 137851 138615 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Morganella morganii S4
23 group_2680 NLDBIP_06080 188083 189504 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S4
24 group_3291 NLDBIP_10585 60284 61021 1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S4
25 group_1056 NLDBIP_12455 75076 75789 1 fadR fatty acid metabolism transcriptional regulator FadR Morganella morganii S4
26 group_430 NLDBIP_13800 13685 14395 -1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S4
27 group_2859 NLDBIP_14705 67033 67806 -1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S4
28 group_2092 NLDBIP_16630 79599 80285 -1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S4
29 group_3101 NLDBIP_17565 15543 17030 -1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S4
30 group_673 LHKJJB_00860 151111 152532 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S3
31 group_2571 LHKJJB_01525 291314 292651 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S3
32 group_161 LHKJJB_02735 115375 116139 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Morganella morganii S3
33 group_2680 LHKJJB_02960 165607 167028 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S3
34 group_430 LHKJJB_09050 145354 146064 1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S3
35 group_3291 LHKJJB_10770 130507 131244 -1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S3
36 group_1056 LHKJJB_12315 75121 75834 1 fadR fatty acid metabolism transcriptional regulator FadR Morganella morganii S3
37 group_2859 LHKJJB_14640 73932 74693 1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S3
38 group_2092 LHKJJB_16175 378 1064 1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S3
39 group_3101 LHKJJB_17485 15543 17030 -1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S3
40 group_673 HKOGLL_00900 156622 158043 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S5
41 group_2571 HKOGLL_01565 296825 298162 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S5
42 group_161 HKOGLL_06210 37239 38003 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Morganella morganii S5
43 group_2680 HKOGLL_06435 87471 88892 1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S5
44 group_430 HKOGLL_08600 145354 146064 1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S5
45 group_1056 HKOGLL_10930 75121 75834 1 fadR fatty acid metabolism transcriptional regulator FadR Morganella morganii S5
46 group_2859 HKOGLL_13260 73932 74693 1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S5
47 group_3291 HKOGLL_13830 63808 64545 -1 mngR DNA-binding transcriptional regulator, GntR family Morganella morganii S5
48 group_2092 HKOGLL_15945 378 1064 1 fadR DNA-binding transcriptional regulator, FadR family Morganella morganii S5
49 group_3101 HKOGLL_17300 15543 17030 -1 aRO8 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain Morganella morganii S5
50 group_1056 F4V73_RS03825 809307 810026 1 fadR fatty acid metabolism transcriptional regulator FadR Morganella psychrotolerans
51 group_673 F4V73_RS04140 874990 876411 1 PLP-dependent aminotransferase family protein Morganella psychrotolerans
52 group_2571 F4V73_RS04855 1032182 1033519 1 PLP-dependent aminotransferase family protein Morganella psychrotolerans
53 group_161 F4V73_RS08690 1798377 1799141 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Morganella psychrotolerans
54 group_2680 F4V73_RS08920 1851311 1852753 1 PLP-dependent aminotransferase family protein Morganella psychrotolerans
55 group_3101 F4V73_RS10395 190909 192396 1 PLP-dependent aminotransferase family protein Morganella psychrotolerans
56 group_430 F4V73_RS13590 350976 351686 1 UTRA domain-containing protein Morganella psychrotolerans
57 group_2859 F4V73_RS14250 69385 70149 -1 FCD domain-containing protein Morganella psychrotolerans
58 group_2092 F4V73_RS17765 195389 196075 -1 FadR/GntR family transcriptional regulator Morganella psychrotolerans
59 group_161 PMI_RS01990 469587 470237 -1 GntR family transcriptional regulator Proteus mirabilis HI4320
60 group_161 PMI_RS05125 1119084 1119797 -1 FadR/GntR family transcriptional regulator Proteus mirabilis HI4320
61 group_673 PMI_RS06935 1516834 1518249 -1 PLP-dependent aminotransferase family protein Proteus mirabilis HI4320
62 group_1056 PMI_RS07320 1604205 1604924 -1 fadR fatty acid metabolism transcriptional regulator FadR Proteus mirabilis HI4320
63 group_161 PMI_RS10090 2205495 2206265 -1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR Proteus mirabilis HI4320
64 group_2092 PMI_RS15090 3349328 3350014 1 FadR/GntR family transcriptional regulator Proteus mirabilis HI4320
65 group_430 PMI_RS17685 3882343 3883002 -1 GntR family transcriptional regulator Proteus mirabilis HI4320