Orthogroup:group_2092


Homologs in group_2092

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15745 FBDBKF_15745 Morganella morganii S1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
EHELCC_17660 EHELCC_17660 Morganella morganii S2 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
NLDBIP_19330 NLDBIP_19330 Morganella morganii S4 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
LHKJJB_18100 LHKJJB_18100 Morganella morganii S3 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
HKOGLL_18980 HKOGLL_18980 Morganella morganii S5 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
F4V73_RS07945 F4V73_RS07945 Morganella psychrotolerans tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB
PMI_RS05955 PMI_RS05955 Proteus mirabilis HI4320 - threo-3-hydroxy-L-aspartate ammonia-lyase

Distribution of group_2092 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2092 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2092

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2092.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tdcB 6
2 - 1

Product

# Product Occurence
1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB 6
2 threo-3-hydroxy-L-aspartate ammonia-lyase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1171 7 E Amino acid transport and metabolism (E) Threonine deaminase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00291 7 Pyridoxal-phosphate dependent enzyme

Annotations of the 125 SwissProt hits

Annotation Number of occurrences
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1
Catabolic L-serine/threonine dehydratase 1
Cystathionine beta-synthase 6
Cysteine synthase 10
Cysteine synthase B 3
Diaminopropionate ammonia-lyase 4
L-Threonine dehydratase biosynthetic IlvA 1
L-serine dehydratase 6
L-serine dehydratase/L-threonine deaminase 4
L-threo-3-hydroxyaspartate ammonia-lyase 2
L-threonine ammonia-lyase 2
L-threonine dehydratase biosynthetic IlvA 25
L-threonine dehydratase catabolic TdcB 14
O-acetylserine dependent cystathionine beta-synthase 1
Phenylserine dehydratase 1
Probable D-serine dehydratase 6
Probable cysteine synthase 1
Putative threonine dehydratase 1
Putative truncated L-serine dehydratase SDL1 1
Putative truncated L-serine dehydratase YIL168W 1
Serine dehydratase-like 3
Serine racemase 9
Threonine dehydratase 1
Threonine dehydratase 1 biosynthetic, chloroplastic 1
Threonine dehydratase 2 biosynthetic, chloroplastic 1
Threonine dehydratase biosynthetic, chloroplastic 2
Threonine dehydratase biosynthetic, chloroplastic (Fragment) 1
Threonine dehydratase, mitochondrial 3
Threonine dehydratase-like protein AKTS1-1 1
Threonine synthase 11
beta-hydroxyaspartate dehydratase 1

Protein length

Min length 323
Max length 328
Mean length (sd) 327.3 (1.9)
Median length 328.0

Protein length distribution