Orthogroup:group_1056



Homologs in group_1056

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05980 FBDBKF_05980 Morganella morganii S1 cdsA phosphatidate cytidylyltransferase
EHELCC_09025 EHELCC_09025 Morganella morganii S2 cdsA phosphatidate cytidylyltransferase
NLDBIP_09405 NLDBIP_09405 Morganella morganii S4 cdsA phosphatidate cytidylyltransferase
LHKJJB_08350 LHKJJB_08350 Morganella morganii S3 cdsA phosphatidate cytidylyltransferase
HKOGLL_07900 HKOGLL_07900 Morganella morganii S5 cdsA phosphatidate cytidylyltransferase
F4V73_RS15915 F4V73_RS15915 Morganella psychrotolerans cdsA phosphatidate cytidylyltransferase
PMI_RS11255 PMI_RS11255 Proteus mirabilis HI4320 cdsA phosphatidate cytidylyltransferase

Distribution of group_1056 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1056 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1056

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1056.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cdsA 7

Product

# Product Occurence
1 phosphatidate cytidylyltransferase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0575 7 I Lipid transport and metabolism (I) CDP-diglyceride synthetase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01148 7 Cytidylyltransferase family

Annotations of the 56 SwissProt hits

Annotation Number of occurrences
Phosphatidate cytidylyltransferase 39
Phosphatidate cytidylyltransferase 1 5
Phosphatidate cytidylyltransferase 2 5
Phosphatidate cytidylyltransferase 3 1
Phosphatidate cytidylyltransferase 4, chloroplastic 1
Phosphatidate cytidylyltransferase 5, chloroplastic 1
Phosphatidate cytidylyltransferase, photoreceptor-specific 1
Putative phosphatidate cytidylyltransferase 2
Uncharacterized protein YnbB 1

Protein length

Min length 285
Max length 296
Mean length (sd) 293.1 (4.9)
Median length 296.0

Protein length distribution