Homologs in group_2840

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10540 FBDBKF_10540 100.0 Morganella morganii S1 fadR DNA-binding transcriptional regulator, FadR family
EHELCC_14875 EHELCC_14875 100.0 Morganella morganii S2 fadR DNA-binding transcriptional regulator, FadR family
NLDBIP_14705 NLDBIP_14705 100.0 Morganella morganii S4 fadR DNA-binding transcriptional regulator, FadR family
LHKJJB_14640 LHKJJB_14640 100.0 Morganella morganii S3 fadR DNA-binding transcriptional regulator, FadR family
F4V73_RS14250 F4V73_RS14250 91.3 Morganella psychrotolerans - FCD domain-containing protein

Distribution of the homologs in the orthogroup group_2840

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2840

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39161 9.21e-112 324 63 2 255 4 uxuR Uxu operon transcriptional regulator Escherichia coli (strain K12)
P44487 2.23e-89 268 53 2 241 3 uxuR Uxu operon regulator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9X9E0 1.27e-69 218 50 6 248 4 exuR Exu regulon transcriptional regulator Dickeya chrysanthemi
P0ACL4 8.75e-67 210 47 4 248 3 exuR Exu regulon transcriptional regulator Shigella flexneri
P0ACL2 8.75e-67 210 47 4 248 4 exuR Exu regulon transcriptional regulator Escherichia coli (strain K12)
P0ACL3 8.75e-67 210 47 4 248 3 exuR Exu regulon transcriptional regulator Escherichia coli O157:H7
O07007 1.93e-18 84 31 4 215 1 lutR HTH-type transcriptional regulator LutR Bacillus subtilis (strain 168)
P0ACL8 1.39e-16 80 29 7 234 3 lldR Putative L-lactate dehydrogenase operon regulatory protein Shigella flexneri
P0ACL7 1.39e-16 80 29 7 234 2 lldR Putative L-lactate dehydrogenase operon regulatory protein Escherichia coli (strain K12)
P0ACL5 4.05e-16 78 28 5 232 1 glcC Glc operon transcriptional activator Escherichia coli (strain K12)
P0ACL6 4.05e-16 78 28 5 232 3 glcC Glc operon transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0CL10 1.84e-12 68 28 5 210 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W823 1.84e-12 68 28 5 210 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain SL1344)
P0A2S3 1.84e-12 68 28 5 210 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhi
P0ACL9 2.38e-12 68 28 5 210 1 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli (strain K12)
P0ACM0 2.38e-12 68 28 5 210 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACM1 2.38e-12 68 28 5 210 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O157:H7
P42239 6.5e-12 66 31 8 212 4 ycbG Uncharacterized HTH-type transcriptional regulator YcbG Bacillus subtilis (strain 168)
P67740 1.44e-11 65 27 5 234 4 BQ2027_MB0505 Uncharacterized HTH-type transcriptional regulator Mb0505 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMG7 1.44e-11 65 27 5 234 1 Rv0494 Uncharacterized HTH-type transcriptional regulator Rv0494 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMG6 1.44e-11 65 27 5 234 4 MT0514 Uncharacterized HTH-type transcriptional regulator MT0514 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P67735 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67736 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella typhi
B5BGP6 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi A (strain AKU_12601)
C0PZN5 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi C (strain RKS4594)
Q5PJS9 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RET8 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R0L3 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella enteritidis PT4 (strain P125109)
Q57JC8 7.56e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella choleraesuis (strain SC-B67)
A9MNY5 7.71e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B4TWJ1 8.66e-11 63 28 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella schwarzengrund (strain CVM19633)
B4T751 1.05e-10 63 28 7 219 3 nanR HTH-type transcriptional repressor NanR Salmonella newport (strain SL254)
A7MJD3 1.46e-10 63 27 5 227 3 nanR HTH-type transcriptional repressor NanR Cronobacter sakazakii (strain ATCC BAA-894)
P31460 3.37e-10 61 25 8 236 1 dgoR Galactonate operon transcriptional repressor Escherichia coli (strain K12)
A4WF39 2.31e-09 59 27 6 217 3 nanR HTH-type transcriptional repressor NanR Enterobacter sp. (strain 638)
D2TP58 3.92e-09 59 26 6 220 3 nanR HTH-type transcriptional repressor NanR Citrobacter rodentium (strain ICC168)
F8VI19 1.06e-08 57 27 7 229 3 nanR HTH-type transcriptional repressor NanR Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)
E0T5H9 5.45e-08 55 25 5 228 3 nanR HTH-type transcriptional repressor NanR Edwardsiella tarda (strain FL6-60)
G0E1Z6 6.4e-08 55 25 5 227 3 nanR HTH-type transcriptional repressor NanR Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56)
P0A8W1 8.43e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Shigella flexneri
Q31W95 8.43e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Shigella boydii serotype 4 (strain Sb227)
P0A8W0 8.43e-08 55 23 4 225 1 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12)
B1IQQ3 8.43e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1XHJ9 8.43e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12 / DH10B)
C4ZSW4 8.43e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0T8 8.43e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O8 (strain IAI1)
Q32BB3 8.84e-08 55 23 4 225 3 nanR HTH-type transcriptional repressor NanR Shigella dysenteriae serotype 1 (strain Sd197)
B7NKT7 2.13e-07 53 24 4 224 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q3YX22 2.23e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Shigella sonnei (strain Ss046)
B7NDK4 2.23e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B6I1U4 2.29e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain SE11)
Q8X4W4 2.29e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O157:H7
B7LHT2 2.29e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain 55989 / EAEC)
Q1R6B4 2.38e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain UTI89 / UPEC)
Q8FD57 2.38e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCP0 2.38e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AGC0 2.38e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O1:K1 / APEC
B7N0Z9 2.38e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O81 (strain ED1a)
B7MBY8 2.38e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UJV9 2.74e-07 53 24 4 214 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
O05494 3.64e-07 53 25 7 217 4 ydhC Uncharacterized HTH-type transcriptional regulator YdhC Bacillus subtilis (strain 168)
P54988 6.21e-07 52 28 4 165 4 ntaR Nta operon transcriptional regulator Aminobacter aminovorans
P67742 8.6e-06 49 36 2 97 4 BQ2027_MB0601 Uncharacterized HTH-type transcriptional regulator Mb0601 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMG5 8.6e-06 49 36 2 97 1 mce2R HTH-type transcriptional regulator Mce2R Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMG4 8.6e-06 49 36 2 97 3 mce2R HTH-type transcriptional regulator Mce2R Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8FHD1 1.16e-05 48 24 7 225 4 ydfH Uncharacterized HTH-type transcriptional regulator YdfH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O31459 1.23e-05 48 32 1 82 1 gamR HTH-type transcriptional repressor GamR Bacillus subtilis (strain 168)
P0ACM4 1.38e-05 48 24 7 225 4 ydfH Uncharacterized HTH-type transcriptional regulator YdfH Shigella flexneri
P0ACM3 1.38e-05 48 24 7 225 4 ydfH Uncharacterized HTH-type transcriptional regulator YdfH Escherichia coli O157:H7
P0ACM2 1.38e-05 48 24 7 225 1 rspR HTH-type transcriptional repressor RspR Escherichia coli (strain K12)
O31761 0.00012 45 38 0 67 4 ymfC Uncharacterized HTH-type transcriptional regulator YmfC Bacillus subtilis (strain 168)
P32425 0.000265 44 25 8 213 4 None Uncharacterized HTH-type transcriptional regulator in unstable DNA locus Streptomyces ambofaciens
P49309 0.000385 45 38 1 76 3 mocR Probable rhizopine catabolism regulatory protein MocR Rhizobium meliloti
P96663 0.000535 44 32 0 64 3 ydeF Uncharacterized HTH-type transcriptional regulator YdeF Bacillus subtilis (strain 168)
Q796Q6 0.000647 44 30 0 65 3 yisV Uncharacterized HTH-type transcriptional regulator YisV Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13260
Feature type CDS
Gene fadR
Product DNA-binding transcriptional regulator, FadR family
Location 73932 - 74693 (strand: 1)
Length 762 (nucleotides) / 253 (amino acids)

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2840
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00392 Bacterial regulatory proteins, gntR family
PF07729 FCD domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2186 Transcription (K) K DNA-binding transcriptional regulator, FadR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13637 GntR family transcriptional regulator, uxu operon transcriptional repressor - -

Protein Sequence

MTQFIESKRPYQEVGHALRQMITNMHYAVGDKLPPEREIAEMLSVSRTVVREALIMLELENLIEVRKGSGIYITDLPHQKDGYTDNGSLNAAGPFELLQARQLLESNIAEFAATQATPVDIANMRSALQRERDELKTGEDETGDREFHLAIAQATHNSMLVELLKQSWAWRENNPMWLKLHTRITNKDYRKEWMTDHRVILAAMIKKDPAAAKEAMWQHLENVKQRLLELSDVDDPDFDGYLFNSYPVDLVRN

Flanking regions ( +/- flanking 50bp)

CCAATATCTGGTAAACTGACTCCGATTTCATTTTATTTATGGCACCACAGATGACTCAATTTATCGAATCAAAACGTCCTTATCAGGAAGTTGGCCACGCATTGCGTCAGATGATCACCAATATGCACTATGCTGTGGGTGATAAGCTTCCTCCTGAGCGCGAAATTGCTGAGATGCTCAGTGTGTCCCGTACCGTGGTACGCGAGGCACTTATTATGCTGGAACTGGAAAACCTGATAGAGGTCCGTAAAGGATCCGGTATCTATATTACTGACCTGCCGCATCAGAAAGACGGTTATACGGATAACGGTTCGCTCAATGCCGCCGGTCCGTTTGAGCTGTTACAGGCGCGGCAGCTGCTGGAAAGCAATATCGCGGAATTTGCCGCCACCCAGGCCACACCGGTGGATATCGCCAATATGCGCAGTGCCCTGCAGCGGGAACGCGACGAACTGAAAACCGGGGAAGATGAAACCGGCGACCGCGAGTTTCACCTGGCCATCGCGCAGGCGACCCATAACAGCATGCTGGTGGAGTTACTGAAACAATCCTGGGCATGGCGGGAAAACAACCCGATGTGGCTGAAGCTGCATACGCGCATCACCAATAAAGATTACCGCAAAGAGTGGATGACCGATCACCGGGTGATCCTCGCCGCCATGATTAAGAAAGACCCGGCGGCGGCCAAAGAAGCCATGTGGCAGCATCTGGAAAATGTAAAACAGCGCCTGCTGGAGCTGTCGGATGTCGATGACCCGGACTTTGATGGTTATCTGTTCAATTCCTACCCTGTTGACCTGGTGCGGAACTGATCCCCCTGCACACCTTTTTTACTCTCAGACACCAGAAACCGGGCAAAATC