Homologs in group_150

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04245 FBDBKF_04245 85.4 Morganella morganii S1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
EHELCC_05535 EHELCC_05535 85.4 Morganella morganii S2 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
NLDBIP_05855 NLDBIP_05855 85.4 Morganella morganii S4 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
LHKJJB_02735 LHKJJB_02735 85.4 Morganella morganii S3 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
HKOGLL_06210 HKOGLL_06210 85.4 Morganella morganii S5 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
F4V73_RS08690 F4V73_RS08690 83.5 Morganella psychrotolerans pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
PMI_RS01990 PMI_RS01990 24.4 Proteus mirabilis HI4320 - GntR family transcriptional regulator
PMI_RS05125 PMI_RS05125 35.8 Proteus mirabilis HI4320 - FadR/GntR family transcriptional regulator
PMI_RS17685 PMI_RS17685 24.1 Proteus mirabilis HI4320 - GntR family transcriptional regulator

Distribution of the homologs in the orthogroup group_150

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_150

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACL9 8.63e-133 378 79 0 234 1 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli (strain K12)
P0ACM0 8.63e-133 378 79 0 234 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACM1 8.63e-133 378 79 0 234 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O157:H7
P0CL10 2.26e-132 377 79 0 234 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W823 2.26e-132 377 79 0 234 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain SL1344)
P0A2S3 2.26e-132 377 79 0 234 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhi
P0ACL8 1.88e-39 140 33 4 247 3 lldR Putative L-lactate dehydrogenase operon regulatory protein Shigella flexneri
P0ACL7 1.88e-39 140 33 4 247 2 lldR Putative L-lactate dehydrogenase operon regulatory protein Escherichia coli (strain K12)
P0ACL5 2.69e-23 98 28 3 235 1 glcC Glc operon transcriptional activator Escherichia coli (strain K12)
P0ACL6 2.69e-23 98 28 3 235 3 glcC Glc operon transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O07007 5.71e-23 96 31 2 212 1 lutR HTH-type transcriptional regulator LutR Bacillus subtilis (strain 168)
P39161 4.18e-21 92 33 7 223 4 uxuR Uxu operon transcriptional regulator Escherichia coli (strain K12)
P42239 1.36e-16 79 28 6 229 4 ycbG Uncharacterized HTH-type transcriptional regulator YcbG Bacillus subtilis (strain 168)
Q9X9E0 3.77e-11 65 28 7 245 4 exuR Exu regulon transcriptional regulator Dickeya chrysanthemi
P0ACL4 5.86e-10 61 28 4 210 3 exuR Exu regulon transcriptional regulator Shigella flexneri
P0ACL2 5.86e-10 61 28 4 210 4 exuR Exu regulon transcriptional regulator Escherichia coli (strain K12)
P0ACL3 5.86e-10 61 28 4 210 3 exuR Exu regulon transcriptional regulator Escherichia coli O157:H7
P67740 6.58e-10 61 31 3 137 4 BQ2027_MB0505 Uncharacterized HTH-type transcriptional regulator Mb0505 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMG7 6.58e-10 61 31 3 137 1 Rv0494 Uncharacterized HTH-type transcriptional regulator Rv0494 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMG6 6.58e-10 61 31 3 137 4 MT0514 Uncharacterized HTH-type transcriptional regulator MT0514 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P44487 7.6e-10 61 28 8 234 3 uxuR Uxu operon regulator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9KBQ0 4.22e-09 59 38 1 76 3 araR Arabinose metabolism transcriptional repressor Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
A7MJD3 8.66e-09 58 28 6 228 3 nanR HTH-type transcriptional repressor NanR Cronobacter sakazakii (strain ATCC BAA-894)
P31460 2.45e-08 56 28 9 225 1 dgoR Galactonate operon transcriptional repressor Escherichia coli (strain K12)
Q8X835 6.28e-08 55 43 0 65 3 frlR Probable fructoselysine utilization operon transcriptional repressor Escherichia coli O157:H7
P45544 6.46e-08 55 43 0 65 1 frlR Probable fructoselysine utilization operon transcriptional repressor Escherichia coli (strain K12)
Q83PX4 6.52e-08 55 43 0 65 3 frlR Probable fructoselysine utilization operon transcriptional repressor Shigella flexneri
Q9S470 7.37e-08 55 41 0 60 3 araR Arabinose metabolism transcriptional repressor Geobacillus stearothermophilus
P31475 9.56e-08 54 39 4 120 4 yieP Uncharacterized HTH-type transcriptional regulator YieP Escherichia coli (strain K12)
Q3YX22 1.32e-07 54 34 2 120 3 nanR HTH-type transcriptional repressor NanR Shigella sonnei (strain Ss046)
P67742 1.4e-07 54 34 1 109 4 BQ2027_MB0601 Uncharacterized HTH-type transcriptional regulator Mb0601 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMG5 1.4e-07 54 34 1 109 1 mce2R HTH-type transcriptional regulator Mce2R Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMG4 1.4e-07 54 34 1 109 3 mce2R HTH-type transcriptional regulator Mce2R Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P96711 2.35e-07 54 42 1 66 1 araR Arabinose metabolism transcriptional repressor Bacillus subtilis (strain 168)
O31459 4.25e-07 53 42 0 64 1 gamR HTH-type transcriptional repressor GamR Bacillus subtilis (strain 168)
G0E1Z6 4.99e-07 53 28 7 228 3 nanR HTH-type transcriptional repressor NanR Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56)
Q82IW0 5.69e-07 52 50 1 56 3 dasR HTH-type transcriptional repressor DasR Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
D2TP58 6.61e-07 52 27 7 248 3 nanR HTH-type transcriptional repressor NanR Citrobacter rodentium (strain ICC168)
P0A8W1 6.67e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Shigella flexneri
Q31W95 6.67e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Shigella boydii serotype 4 (strain Sb227)
P0A8W0 6.67e-07 52 26 6 229 1 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12)
B1IQQ3 6.67e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1XHJ9 6.67e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12 / DH10B)
C4ZSW4 6.67e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0T8 6.67e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O8 (strain IAI1)
Q32BB3 6.86e-07 52 26 6 229 3 nanR HTH-type transcriptional repressor NanR Shigella dysenteriae serotype 1 (strain Sd197)
A4WF39 8.52e-07 52 28 3 164 3 nanR HTH-type transcriptional repressor NanR Enterobacter sp. (strain 638)
P96663 8.75e-07 53 46 0 58 3 ydeF Uncharacterized HTH-type transcriptional regulator YdeF Bacillus subtilis (strain 168)
F8VI19 8.83e-07 52 33 2 119 3 nanR HTH-type transcriptional repressor NanR Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)
B7NKT7 9.52e-07 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B6I1U4 9.98e-07 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain SE11)
Q8X4W4 9.98e-07 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O157:H7
B7LHT2 9.98e-07 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain 55989 / EAEC)
Q1R6B4 1.05e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain UTI89 / UPEC)
Q8FD57 1.05e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCP0 1.05e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AGC0 1.05e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O1:K1 / APEC
B7N0Z9 1.05e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O81 (strain ED1a)
B7MBY8 1.05e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7NDK4 1.07e-06 52 33 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
O32152 1.25e-06 51 45 0 53 1 yurK Uncharacterized HTH-type transcriptional regulator YurK Bacillus subtilis (strain 168)
A9MNY5 1.56e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B4T751 1.72e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella newport (strain SL254)
P67735 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67736 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella typhi
B5BGP6 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi A (strain AKU_12601)
C0PZN5 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi C (strain RKS4594)
Q5PJS9 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RET8 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R0L3 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella enteritidis PT4 (strain P125109)
Q57JC8 1.75e-06 51 32 2 122 3 nanR HTH-type transcriptional repressor NanR Salmonella choleraesuis (strain SC-B67)
B4TWJ1 1.77e-06 51 27 6 233 3 nanR HTH-type transcriptional repressor NanR Salmonella schwarzengrund (strain CVM19633)
B0TRI9 2.82e-06 50 28 4 157 3 fadR Fatty acid metabolism regulator protein Shewanella halifaxensis (strain HAW-EB4)
Q9K492 2.94e-06 50 48 1 56 1 dasR HTH-type transcriptional repressor DasR Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
B7UJV9 3.46e-06 50 32 2 120 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
O34817 4.42e-06 50 45 0 60 1 nagR HTH-type transcriptional repressor NagR Bacillus subtilis (strain 168)
Q796Q6 4.72e-06 50 34 1 88 3 yisV Uncharacterized HTH-type transcriptional regulator YisV Bacillus subtilis (strain 168)
E0T5H9 5.33e-06 50 33 2 116 3 nanR HTH-type transcriptional repressor NanR Edwardsiella tarda (strain FL6-60)
Q57SD4 5.55e-06 49 38 1 67 4 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella choleraesuis (strain SC-B67)
P54988 6.42e-06 49 33 4 118 4 ntaR Nta operon transcriptional regulator Aminobacter aminovorans
Q8VV01 6.59e-06 49 49 1 55 2 dasR HTH-type transcriptional repressor DasR Streptomyces griseus
Q7CR30 8e-06 49 38 1 67 2 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P96061 8e-06 49 38 1 67 4 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella typhi
Q5PFQ9 8.15e-06 49 38 1 67 4 phnR Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q7A875 1.73e-05 48 43 0 46 3 norG HTH-type transcriptional regulator NorG Staphylococcus aureus (strain N315)
Q99XA5 1.73e-05 48 43 0 46 3 norG HTH-type transcriptional regulator NorG Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q9LBW6 2.76e-05 47 36 1 74 4 rmpR Putative HTH-type transcriptional regulator RmpR Mycobacterium gastri
O86331 4.57e-05 47 35 1 92 1 Rv0792c HTH-type transcriptional regulator Rv0792c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A8H5C1 5.85e-05 46 29 6 158 3 fadR Fatty acid metabolism regulator protein Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
O05494 9.22e-05 45 47 1 48 4 ydhC Uncharacterized HTH-type transcriptional regulator YdhC Bacillus subtilis (strain 168)
O31761 0.000118 45 44 2 70 4 ymfC Uncharacterized HTH-type transcriptional regulator YmfC Bacillus subtilis (strain 168)
Q0HJX1 0.000122 45 28 4 157 3 fadR Fatty acid metabolism regulator protein Shewanella sp. (strain MR-4)
Q0HW67 0.000128 45 28 4 157 3 fadR Fatty acid metabolism regulator protein Shewanella sp. (strain MR-7)
O34712 0.000136 44 34 0 63 2 ytrA HTH-type transcriptional repressor YtrA Bacillus subtilis (strain 168)
Q8ED80 0.000148 45 28 4 157 3 fadR Fatty acid metabolism regulator protein Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
P16684 0.000207 45 44 1 58 1 phnF Probable transcriptional regulator PhnF Escherichia coli (strain K12)
Q2YUS3 0.000235 45 41 0 46 3 norG HTH-type transcriptional regulator NorG Staphylococcus aureus (strain bovine RF122 / ET3-1)
A9CEY8 0.000236 45 33 1 71 2 smoD HTH-type transcriptional regulator SmoD Agrobacterium fabrum (strain C58 / ATCC 33970)
Q8NS92 0.000265 45 34 0 64 3 pdxR HTH-type pyridoxine biosynthesis transcriptional regulator PdxR Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
A1S6X3 0.000343 44 28 4 157 3 fadR Fatty acid metabolism regulator protein Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
A0KVP9 0.0004 44 27 4 157 3 fadR Fatty acid metabolism regulator protein Shewanella sp. (strain ANA-3)
Q5HJR1 0.000424 44 41 0 46 3 norG HTH-type transcriptional regulator NorG Staphylococcus aureus (strain COL)
Q2G1P1 0.000424 44 41 0 46 1 norG HTH-type transcriptional regulator NorG Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FKF1 0.000424 44 41 0 46 3 norG HTH-type transcriptional regulator NorG Staphylococcus aureus (strain USA300)
A4Y625 0.00068 43 29 3 131 3 fadR Fatty acid metabolism regulator protein Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
P31453 0.000706 43 43 2 60 4 yidP Uncharacterized HTH-type transcriptional regulator YidP Escherichia coli (strain K12)
Q9CPJ0 0.000886 43 36 1 66 3 fadR Fatty acid metabolism regulator protein Pasteurella multocida (strain Pm70)
Q7N3Z5 0.000894 43 36 1 66 3 fadR Fatty acid metabolism regulator protein Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
C5B9W3 0.001 43 37 1 66 3 fadR Fatty acid metabolism regulator protein Edwardsiella ictaluri (strain 93-146)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10090
Feature type CDS
Gene pdhR
Product pyruvate dehydrogenase complex transcriptional repressor PdhR
Location 2205495 - 2206265 (strand: -1)
Length 771 (nucleotides) / 256 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_150
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF00392 Bacterial regulatory proteins, gntR family
PF07729 FCD domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2186 Transcription (K) K DNA-binding transcriptional regulator, FadR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex - -

Protein Sequence

MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF

Flanking regions ( +/- flanking 50bp)

GACATTTCAATAACCAAGGTAATAGTTATCCAATAATGGCTTCTAGCAATATGGCTTACACAAAGATCCGCCAACCAAAGCTTTCTGATGTGATAGAACAACAACTTGAGCATCTTATTTTAGAAGGCACCCTACGTCCGGGGGAAAAACTCCTGCCTGAACGTGAGCTGGCAAAGCAATTTGATGTATCGCGTCCTTCATTGCGTGAAGCAATCCAAAAATTGGAAGCAAAAGGTTTTTTATTACGCCGCCAAGGTGGTGGAACCTTTGTGCAAGATAACCTTTGGCAAAGCTTTAGCGATCCTCTCGCTCAACTCCTCAGTGGGCATCCAGAATCTCAATTTGATCTGTTAGAAACACGCCATGCCCTTGAAGGTATTGCGGCTTATTATGCTGCATTACGCGGTACTGATGATGATCTTGAGCGTATTAAAGCCAGTCATGCTCGCATTATTGATGCTCATGATAAAGGGGATATCGCAGCGGAGTCGGATGCGGTATTGCAATACCAATTAATCGTTACGGAAGCTGCTCATAATGTCGTTTTGCTACACTTATTAAGGTGTATGGTGCCAATGCTTGAGCAGAATATCCGACAAAATTTTGAGTTTCTTTATACACGTAAAGAGATGTTAACTGCTGTAAGTGAGCATCGCACACAGATTTATCAGGCGATTATTAATAGAGAGCCAGAAGCAGCCCGTGAAGCTTCACACCGCCATCTGGCCTTTATTGAAGATGTTTTGTTGGATATGAGTCGTGAACATACTCGTCGTGAGCGTTCTTTACGCCGGCTCCAACAACATCCTGATTTATTTTAGTAGCACAGATCCTGACCGCTGAGTCTGTACTACCTATCTCCCTGCAATAT