Orthogroup:group_161


Homologs in group_161

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04245 FBDBKF_04245 Morganella morganii S1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
EHELCC_05535 EHELCC_05535 Morganella morganii S2 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
NLDBIP_05855 NLDBIP_05855 Morganella morganii S4 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
LHKJJB_02735 LHKJJB_02735 Morganella morganii S3 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
HKOGLL_06210 HKOGLL_06210 Morganella morganii S5 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
F4V73_RS08690 F4V73_RS08690 Morganella psychrotolerans pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
PMI_RS01990 PMI_RS01990 Proteus mirabilis HI4320 - GntR family transcriptional regulator
PMI_RS05125 PMI_RS05125 Proteus mirabilis HI4320 - FadR/GntR family transcriptional regulator
PMI_RS10090 PMI_RS10090 Proteus mirabilis HI4320 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR

Distribution of group_161 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_161 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_161

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_161.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pdhR 7
2 - 2

Product

# Product Occurence
1 pyruvate dehydrogenase complex transcriptional repressor PdhR 7
2 GntR family transcriptional regulator 1
3 FadR/GntR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1802 1 K Transcription (K) DNA-binding transcriptional regulator, GntR family
COG2186 8 K Transcription (K) DNA-binding transcriptional regulator, FadR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05799 7 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00392 9 Bacterial regulatory proteins, gntR family
PF07729 9 FCD domain

Annotations of the 208 SwissProt hits

Annotation Number of occurrences
Arabinose metabolism transcriptional repressor 3
Exu regulon transcriptional regulator 4
Fatty acid metabolism regulator protein 87
Galactonate operon transcriptional repressor 1
Glc operon transcriptional activator 2
Gluconate operon transcriptional repressor 1
HTH-type pyridoxine biosynthesis transcriptional regulator PdxR 1
HTH-type transcriptional regulator GmuR 1
HTH-type transcriptional regulator LutR 1
HTH-type transcriptional regulator Mce2R 2
HTH-type transcriptional regulator NorG 6
HTH-type transcriptional regulator Rv0792c 1
HTH-type transcriptional regulator SmoD 1
HTH-type transcriptional repressor DasR 3
HTH-type transcriptional repressor GamR 1
HTH-type transcriptional repressor NagR 1
HTH-type transcriptional repressor NanR 38
HTH-type transcriptional repressor RspR 1
HTH-type transcriptional repressor STM4068 1
HTH-type transcriptional repressor YtrA 1
Histidine utilization repressor 3
Mannosyl-D-glycerate transport/metabolism system repressor MngR 1
Nta operon transcriptional regulator 1
Probable fructoselysine utilization operon transcriptional repressor 3
Probable transcriptional regulator PhnF 1
Putative HTH-type transcriptional regulator RmpR 1
Putative L-lactate dehydrogenase operon regulatory protein 2
Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons 4
Pyruvate dehydrogenase complex repressor 6
Uncharacterized HTH-type transcriptional regulator BphR 1
Uncharacterized HTH-type transcriptional regulator MT0514 1
Uncharacterized HTH-type transcriptional regulator Mb0505 1
Uncharacterized HTH-type transcriptional regulator Mb0601 1
Uncharacterized HTH-type transcriptional regulator RB1450 1
Uncharacterized HTH-type transcriptional regulator Rv0494 1
Uncharacterized HTH-type transcriptional regulator YcbG 1
Uncharacterized HTH-type transcriptional regulator YdeF 1
Uncharacterized HTH-type transcriptional regulator YdfD 1
Uncharacterized HTH-type transcriptional regulator YdfH 3
Uncharacterized HTH-type transcriptional regulator YdhC 1
Uncharacterized HTH-type transcriptional regulator YegW 4
Uncharacterized HTH-type transcriptional regulator YhcF 1
Uncharacterized HTH-type transcriptional regulator YidP 1
Uncharacterized HTH-type transcriptional regulator YieP 1
Uncharacterized HTH-type transcriptional regulator YihL 3
Uncharacterized HTH-type transcriptional regulator YisV 1
Uncharacterized HTH-type transcriptional regulator YmfC 1
Uncharacterized HTH-type transcriptional regulator YurK 1
Uncharacterized HTH-type transcriptional regulator in unstable DNA locus 1
Uxu operon regulator 1
Uxu operon transcriptional regulator 1

Protein length

Min length 216
Max length 256
Mean length (sd) 248.1 (13.3)
Median length 254.0

Protein length distribution