Homologs in group_150

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04245 FBDBKF_04245 23.9 Morganella morganii S1 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
EHELCC_05535 EHELCC_05535 23.9 Morganella morganii S2 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
NLDBIP_05855 NLDBIP_05855 23.9 Morganella morganii S4 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
LHKJJB_02735 LHKJJB_02735 23.9 Morganella morganii S3 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
HKOGLL_06210 HKOGLL_06210 23.9 Morganella morganii S5 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
F4V73_RS08690 F4V73_RS08690 25.9 Morganella psychrotolerans pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
PMI_RS05125 PMI_RS05125 24.6 Proteus mirabilis HI4320 - FadR/GntR family transcriptional regulator
PMI_RS10090 PMI_RS10090 24.4 Proteus mirabilis HI4320 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR
PMI_RS17685 PMI_RS17685 27.2 Proteus mirabilis HI4320 - GntR family transcriptional regulator

Distribution of the homologs in the orthogroup group_150

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_150

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O05494 3.29e-14 72 26 5 207 4 ydhC Uncharacterized HTH-type transcriptional regulator YdhC Bacillus subtilis (strain 168)
Q8FHD1 4.17e-12 66 26 3 194 4 ydfH Uncharacterized HTH-type transcriptional regulator YdfH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACM4 4.3e-12 66 26 3 194 4 ydfH Uncharacterized HTH-type transcriptional regulator YdfH Shigella flexneri
P0ACM3 4.3e-12 66 26 3 194 4 ydfH Uncharacterized HTH-type transcriptional regulator YdfH Escherichia coli O157:H7
P0ACM2 4.3e-12 66 26 3 194 1 rspR HTH-type transcriptional repressor RspR Escherichia coli (strain K12)
P32425 3.81e-11 63 29 4 190 4 None Uncharacterized HTH-type transcriptional regulator in unstable DNA locus Streptomyces ambofaciens
P54988 1.67e-10 61 26 3 192 4 ntaR Nta operon transcriptional regulator Aminobacter aminovorans
P67735 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67736 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella typhi
B5BGP6 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi A (strain AKU_12601)
C0PZN5 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi C (strain RKS4594)
Q5PJS9 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RET8 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R0L3 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella enteritidis PT4 (strain P125109)
Q57JC8 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella choleraesuis (strain SC-B67)
B4T751 4.49e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella newport (strain SL254)
B4TWJ1 4.9e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella schwarzengrund (strain CVM19633)
A9MNY5 5.94e-08 55 30 9 219 3 nanR HTH-type transcriptional repressor NanR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
F8VI19 7.12e-08 54 29 8 214 3 nanR HTH-type transcriptional repressor NanR Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419)
O07007 1.34e-07 53 26 7 204 1 lutR HTH-type transcriptional regulator LutR Bacillus subtilis (strain 168)
G0E1Z6 1.58e-07 53 27 8 220 3 nanR HTH-type transcriptional repressor NanR Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56)
E0T5H9 2.95e-07 53 28 8 219 3 nanR HTH-type transcriptional repressor NanR Edwardsiella tarda (strain FL6-60)
P0A8W1 7.48e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Shigella flexneri
Q31W95 7.48e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Shigella boydii serotype 4 (strain Sb227)
P0A8W0 7.48e-07 52 28 9 219 1 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12)
B1IQQ3 7.48e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B1XHJ9 7.48e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12 / DH10B)
C4ZSW4 7.48e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0T8 7.48e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O8 (strain IAI1)
Q32BB3 7.62e-07 52 28 9 219 3 nanR HTH-type transcriptional repressor NanR Shigella dysenteriae serotype 1 (strain Sd197)
Q3YX22 8.71e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Shigella sonnei (strain Ss046)
B7NKT7 8.79e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B6I1U4 9.13e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain SE11)
B7NDK4 9.13e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q8X4W4 9.13e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O157:H7
B7LHT2 9.13e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain 55989 / EAEC)
Q1R6B4 9.48e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli (strain UTI89 / UPEC)
Q8FD57 9.48e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCP0 9.48e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AGC0 9.48e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O1:K1 / APEC
B7N0Z9 9.48e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O81 (strain ED1a)
B7MBY8 9.48e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O45:K1 (strain S88 / ExPEC)
D2TP58 9.52e-07 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Citrobacter rodentium (strain ICC168)
A7MJD3 9.61e-07 51 29 10 221 3 nanR HTH-type transcriptional repressor NanR Cronobacter sakazakii (strain ATCC BAA-894)
B7UJV9 1.47e-06 51 28 9 219 3 nanR HTH-type transcriptional repressor NanR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P37335 2.19e-05 47 28 6 196 4 bphR Uncharacterized HTH-type transcriptional regulator BphR Paraburkholderia xenovorans (strain LB400)
P42239 5.09e-05 46 26 9 217 4 ycbG Uncharacterized HTH-type transcriptional regulator YcbG Bacillus subtilis (strain 168)
P39161 5.56e-05 46 27 10 232 4 uxuR Uxu operon transcriptional regulator Escherichia coli (strain K12)
A4WF39 0.000105 45 25 8 216 3 nanR HTH-type transcriptional repressor NanR Enterobacter sp. (strain 638)
P0CL10 0.000473 43 46 1 52 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W823 0.000473 43 46 1 52 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhimurium (strain SL1344)
P0A2S3 0.000473 43 46 1 52 3 pdhR Pyruvate dehydrogenase complex repressor Salmonella typhi
P0ACL9 0.000519 43 46 1 52 1 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli (strain K12)
P0ACM0 0.000519 43 46 1 52 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACM1 0.000519 43 46 1 52 3 pdhR Pyruvate dehydrogenase complex repressor Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01990
Feature type CDS
Gene -
Product GntR family transcriptional regulator
Location 469587 - 470237 (strand: -1)
Length 651 (nucleotides) / 216 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_150
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF00392 Bacterial regulatory proteins, gntR family
PF07729 FCD domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1802 Transcription (K) K DNA-binding transcriptional regulator, GntR family

Protein Sequence

MSQVLEVEKQLRKLILNMELGPGERLTERWAEAKFNASRTPVRAALQKLESEGLICRDGIRWLVAPIDADEIEQLCIYREILEVAALKLSVSQITEEQLNNLERLLKETTVDSPEESMENAGTRFHRELARLCNNAFIIEGINDALRRLSRARWLDRAPSNPAWDEHREIFVALRSRDTDKAVELLATHLCESRLRLLDTITSSKRSLRARGIAIS

Flanking regions ( +/- flanking 50bp)

CCATATAGATAATTTATTTTACTGTCAATTTTTAGGAGAGTATTGCCGTTATGAGCCAAGTGTTAGAGGTTGAAAAACAATTAAGAAAACTGATACTCAACATGGAACTAGGCCCAGGAGAACGGTTAACTGAACGCTGGGCTGAAGCGAAATTTAACGCATCGAGAACTCCCGTTCGAGCCGCATTACAAAAGTTGGAATCAGAGGGACTTATATGTCGTGATGGTATACGTTGGTTAGTGGCACCAATCGATGCCGATGAAATCGAACAATTATGTATTTACCGAGAAATACTGGAGGTAGCAGCATTAAAACTTTCAGTCAGCCAGATCACCGAAGAACAGTTGAACAATTTGGAACGCCTGCTTAAAGAAACCACGGTAGATTCACCAGAAGAGAGCATGGAAAATGCTGGAACACGATTCCATAGAGAGTTGGCACGCCTTTGTAATAACGCATTTATTATTGAAGGGATAAATGATGCCCTACGTAGGCTTTCGCGAGCACGATGGCTTGATAGAGCGCCGTCTAATCCAGCGTGGGATGAGCATCGTGAAATATTTGTCGCACTTCGTTCGAGAGATACGGACAAAGCCGTAGAACTACTCGCCACTCATTTGTGCGAAAGTAGACTCCGTTTACTAGATACCATTACATCTAGTAAACGTAGCCTAAGAGCAAGAGGCATTGCGATATCCTGACCAAATACCGCCAACCTCATTTACAACATGAATTGATAAACAAATATATT