PF00361


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00361, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 42 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00361
Description Proton-conducting membrane transporter

Occurence in the database

PF00361 is associated with 42 different proteins (see tab "Protein list" and "Profile")
The 42 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_793 FBDBKF_03720 146179 147759 -1 hydrogenase 4 subunit F Morganella morganii S1
1 group_795 FBDBKF_03730 148427 149869 -1 nuoL hydrogenase 4 subunit D Morganella morganii S1
2 group_797 FBDBKF_03740 150845 152860 -1 hyfB hydrogenase 4 subunit B Morganella morganii S1
3 group_1887 FBDBKF_14105 14716 16173 -1 nuoN NADH-quinone oxidoreductase subunit NuoN Morganella morganii S1
4 group_1888 FBDBKF_14110 16180 17700 -1 nuoM NADH-quinone oxidoreductase subunit M Morganella morganii S1
5 group_1889 FBDBKF_14115 17720 19561 -1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S1
6 group_797 EHELCC_06795 94243 96258 1 hyfB hydrogenase 4 subunit B Morganella morganii S2
7 group_795 EHELCC_06805 97234 98676 1 nuoL hydrogenase 4 subunit D Morganella morganii S2
8 group_793 EHELCC_06815 99344 100924 1 hydrogenase 4 subunit F Morganella morganii S2
9 group_1889 EHELCC_08165 97424 99265 1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S2
10 group_1888 EHELCC_08170 99285 100805 1 nuoM NADH-quinone oxidoreductase subunit M Morganella morganii S2
11 group_1887 EHELCC_08175 100812 102269 1 nuoN NADH-quinone oxidoreductase subunit NuoN Morganella morganii S2
12 group_797 NLDBIP_07120 94116 96131 1 hyfB hydrogenase 4 subunit B Morganella morganii S4
13 group_795 NLDBIP_07130 97107 98549 1 nuoL hydrogenase 4 subunit D Morganella morganii S4
14 group_793 NLDBIP_07140 99217 100797 1 hydrogenase 4 subunit F Morganella morganii S4
15 group_1889 NLDBIP_08490 97424 99265 1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S4
16 group_1888 NLDBIP_08495 99285 100805 1 nuoM NADH-quinone oxidoreductase subunit M Morganella morganii S4
17 group_1887 NLDBIP_08500 100812 102269 1 nuoN NADH-quinone oxidoreductase subunit NuoN Morganella morganii S4
18 group_1887 LHKJJB_05765 154890 156347 -1 nuoN NADH-quinone oxidoreductase subunit NuoN Morganella morganii S3
19 group_1888 LHKJJB_05770 156354 157874 -1 nuoM NADH-quinone oxidoreductase subunit M Morganella morganii S3
20 group_1889 LHKJJB_05775 157894 159735 -1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S3
21 group_797 LHKJJB_06655 57862 59877 1 hyfB hydrogenase 4 subunit B Morganella morganii S3
22 group_795 LHKJJB_06665 60853 62295 1 nuoL hydrogenase 4 subunit D Morganella morganii S3
23 group_793 LHKJJB_06675 62963 64543 1 hydrogenase 4 subunit F Morganella morganii S3
24 group_793 HKOGLL_04255 168844 170424 -1 hydrogenase 4 subunit F Morganella morganii S5
25 group_795 HKOGLL_04265 171092 172534 -1 nuoL hydrogenase 4 subunit D Morganella morganii S5
26 group_797 HKOGLL_04275 173510 175525 -1 hyfB hydrogenase 4 subunit B Morganella morganii S5
27 group_1889 HKOGLL_05140 82015 83856 1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S5
28 group_1888 HKOGLL_05145 83876 85396 1 nuoM NADH-quinone oxidoreductase subunit M Morganella morganii S5
29 group_1887 HKOGLL_05150 85403 86860 1 nuoN NADH-quinone oxidoreductase subunit NuoN Morganella morganii S5
30 group_1889 F4V73_RS02820 594803 596644 1 nuoL NADH-quinone oxidoreductase subunit L Morganella psychrotolerans
31 group_1888 F4V73_RS02825 596664 598184 1 nuoM NADH-quinone oxidoreductase subunit M Morganella psychrotolerans
32 group_1887 F4V73_RS02830 598191 599648 1 nuoN NADH-quinone oxidoreductase subunit NuoN Morganella psychrotolerans
33 group_797 F4V73_RS11130 364578 366593 1 hyfB hydrogenase 4 subunit B Morganella psychrotolerans
34 group_795 F4V73_RS11140 367568 369010 1 hydrogenase 4 subunit D Morganella psychrotolerans
35 group_793 F4V73_RS11150 369678 371258 1 hydrogenase 4 subunit F Morganella psychrotolerans
36 group_1887 PMI_RS08585 1873693 1875162 -1 nuoN NADH-quinone oxidoreductase subunit NuoN Proteus mirabilis HI4320
37 group_1888 PMI_RS08590 1875169 1876698 -1 nuoM NADH-quinone oxidoreductase subunit M Proteus mirabilis HI4320
38 group_1889 PMI_RS08595 1876718 1878553 -1 nuoL NADH-quinone oxidoreductase subunit L Proteus mirabilis HI4320
39 group_793 PMI_RS12475 2765532 2767100 -1 hydrogenase 4 subunit F Proteus mirabilis HI4320
40 group_795 PMI_RS12485 2767767 2769215 -1 hydrogenase 4 subunit D Proteus mirabilis HI4320
41 group_797 PMI_RS12495 2770185 2772200 -1 hyfB hydrogenase 4 subunit B Proteus mirabilis HI4320