Orthogroup:group_1926


Homologs in group_1926

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14330 FBDBKF_14330 Morganella morganii S1 epmC Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)
EHELCC_07950 EHELCC_07950 Morganella morganii S2 epmC Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)
NLDBIP_08275 NLDBIP_08275 Morganella morganii S4 epmC Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)
LHKJJB_05990 LHKJJB_05990 Morganella morganii S3 epmC Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)
HKOGLL_04925 HKOGLL_04925 Morganella morganii S5 epmC Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)
F4V73_RS02575 F4V73_RS02575 Morganella psychrotolerans - elongation factor P hydroxylase
PMI_RS08825 PMI_RS08825 Proteus mirabilis HI4320 - elongation factor P hydroxylase

Distribution of group_1926 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1926 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1926

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1926.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 epmC 5
2 - 2

Product

# Product Occurence
1 Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway) 5
2 elongation factor P hydroxylase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3101 7 J Translation, ribosomal structure and biogenesis (J) Elongation factor P hydroxylase EpmC (EF-P beta-lysylation pathway)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09906 7 elongation factor P hydroxylase [EC:1.14.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04315 7 Elongation factor P hydroxylase

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Elongation factor P hydroxylase 2

Protein length

Min length 183
Max length 184
Mean length (sd) 183.1 (0.4)
Median length 183.0

Protein length distribution