Orthogroup:group_862


Homologs in group_862

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04360 FBDBKF_04360 Morganella morganii S1 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase
EHELCC_05650 EHELCC_05650 Morganella morganii S2 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase
NLDBIP_05970 NLDBIP_05970 Morganella morganii S4 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase
LHKJJB_02850 LHKJJB_02850 Morganella morganii S3 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase
HKOGLL_06325 HKOGLL_06325 Morganella morganii S5 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase
F4V73_RS08805 F4V73_RS08805 Morganella psychrotolerans murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
PMI_RS10225 PMI_RS10225 Proteus mirabilis HI4320 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase

Distribution of group_862 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_862 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_862

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_862.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 murE 7

Product

# Product Occurence
1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase 5
2 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0769 7 M Cell wall/membrane/envelope biogenesis (M) UDP-N-acetylmuramyl tripeptide synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01928 7 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Lysine biosynthesis
Peptidoglycan biosynthesis
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01225 7 Mur ligase family, catalytic domain
PF02875 7 Mur ligase, glutamate ligase domain
PF08245 7 Mur ligase middle domain

Annotations of the 589 SwissProt hits

Annotation Number of occurrences
Cyanophycin synthetase 2
UDP-N-acetylmuramate--L-alanine ligase 107
UDP-N-acetylmuramoyl-L-alanine--L-glutamate ligase 3
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 145
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 2 1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic 3
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase 37
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase 1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 16
UDP-N-acetylmuramoylalanine--D-glutamate ligase 250
UDP-N-acetylmuramyl-tripeptide synthetase 22
UDP-N-acetylmuramyl-tripeptide synthetase 2 1

Protein length

Unique protein length 495

Protein length distribution