COG0589

Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0589, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 55 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Nucleotide-binding universal stress protein, UspA family
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG0589 is associated with 55 different proteins (see tab "Protein list" and "Profile")
The 55 proteins are classified into 8 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2466 FBDBKF_00165 27589 28029 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S1
1 group_2483 FBDBKF_01075 196203 196646 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S1
2 group_592 FBDBKF_01745 40311 40739 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S1
3 group_593 FBDBKF_01750 41022 41459 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S1
4 group_669 FBDBKF_02395 173299 174246 -1 uspE universal stress protein UspE Morganella morganii S1
5 group_1583 FBDBKF_10330 20619 21056 -1 uspA universal stress protein UspA Morganella morganii S1
6 group_195 FBDBKF_11000 21499 21936 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S1
7 group_2885 FBDBKF_11580 112244 112678 -1 uspF universal stress protein UspF Morganella morganii S1
8 group_2483 EHELCC_00470 112222 112665 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S2
9 group_2466 EHELCC_01380 280839 281279 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S2
10 group_592 EHELCC_02215 428131 428559 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S2
11 group_593 EHELCC_02220 428842 429279 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S2
12 group_669 EHELCC_02865 561119 562066 -1 uspE universal stress protein UspE Morganella morganii S2
13 group_195 EHELCC_05225 37532 37969 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S2
14 group_1583 EHELCC_14665 20609 21046 -1 uspA universal stress protein UspA Morganella morganii S2
15 group_2885 EHELCC_17500 10587 11021 -1 uspF universal stress protein UspF Morganella morganii S2
16 group_669 NLDBIP_00595 118070 119017 1 uspE universal stress protein UspE Morganella morganii S4
17 group_593 NLDBIP_01240 250857 251294 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S4
18 group_592 NLDBIP_01245 251577 252005 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S4
19 group_2466 NLDBIP_02080 398857 399297 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S4
20 group_2483 NLDBIP_02990 567471 567914 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S4
21 group_195 NLDBIP_05545 78597 79034 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S4
22 group_1583 NLDBIP_14495 20609 21046 -1 uspA universal stress protein UspA Morganella morganii S4
23 group_2885 NLDBIP_18710 11334 11768 -1 uspF universal stress protein UspF Morganella morganii S4
24 group_592 LHKJJB_00790 140680 141108 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S3
25 group_593 LHKJJB_00795 141391 141828 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S3
26 group_669 LHKJJB_01440 273668 274615 -1 uspE universal stress protein UspE Morganella morganii S3
27 group_195 LHKJJB_02425 56121 56558 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S3
28 group_2466 LHKJJB_03595 6098 6538 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S3
29 group_2483 LHKJJB_04505 174712 175155 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S3
30 group_1583 LHKJJB_14850 120680 121117 1 uspA universal stress protein UspA Morganella morganii S3
31 group_2885 LHKJJB_17940 10587 11021 -1 uspF universal stress protein UspF Morganella morganii S3
32 group_592 HKOGLL_00830 146191 146619 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S5
33 group_593 HKOGLL_00835 146902 147339 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S5
34 group_669 HKOGLL_01480 279179 280126 -1 uspE universal stress protein UspE Morganella morganii S5
35 group_2483 HKOGLL_02540 112427 112870 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S5
36 group_2466 HKOGLL_03450 281044 281484 -1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S5
37 group_1583 HKOGLL_13470 120680 121117 1 uspA universal stress protein UspA Morganella morganii S5
38 group_195 HKOGLL_15805 79561 79998 1 uspA Nucleotide-binding universal stress protein, UspA family Morganella morganii S5
39 group_2885 HKOGLL_18710 13210 13644 1 uspF universal stress protein UspF Morganella morganii S5
40 group_592 F4V73_RS04075 864343 864771 1 universal stress protein Morganella psychrotolerans
41 group_593 F4V73_RS04080 864958 865395 1 universal stress protein Morganella psychrotolerans
42 group_669 F4V73_RS04775 1011803 1012750 -1 uspE universal stress protein UspE Morganella psychrotolerans
43 group_2483 F4V73_RS07895 1648152 1648595 -1 universal stress protein Morganella psychrotolerans
44 group_2885 F4V73_RS08100 1681688 1682122 1 uspF universal stress protein UspF Morganella psychrotolerans
45 group_195 F4V73_RS08225 1711015 1711452 1 universal stress protein Morganella psychrotolerans
46 group_1583 F4V73_RS14030 16592 17029 -1 uspA universal stress protein UspA Morganella psychrotolerans
47 group_2466 PMI_RS04885 1068889 1069323 -1 universal stress protein Proteus mirabilis HI4320
48 group_669 PMI_RS05800 1268218 1269168 -1 uspE universal stress protein UspE Proteus mirabilis HI4320
49 group_593 PMI_RS07010 1531297 1531734 -1 universal stress protein Proteus mirabilis HI4320
50 group_592 PMI_RS07020 1532255 1532683 -1 universal stress protein Proteus mirabilis HI4320
51 group_195 PMI_RS07865 1721378 1721821 1 universal stress protein Proteus mirabilis HI4320
52 group_195 PMI_RS07875 1722878 1723312 -1 universal stress protein Proteus mirabilis HI4320
53 group_195 PMI_RS09630 2104440 2104877 1 universal stress protein Proteus mirabilis HI4320
54 group_1583 PMI_RS14880 3303320 3303754 -1 uspA universal stress protein UspA Proteus mirabilis HI4320