PF13353

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF13353
Protein list: lists the 36 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF13353
Description 4Fe-4S single cluster domain

Occurence in the database

PF13353 is associated with 36 different proteins
The 36 proteins are classified into 6 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_870 FBDBKF_03765 156950 157978 1 epmB EF-P beta-lysylation protein EpmB Morganella morganii S1
1 group_142 FBDBKF_07125 94259 94999 -1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S1
2 group_1373 FBDBKF_08105 159858 161207 1 Uncharacterized radical SAM domain-containing protein Morganella morganii S1
3 group_1478 FBDBKF_08780 135628 136095 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S1
4 group_1534 FBDBKF_09585 14262 15245 -1 moaA GTP 3',8-cyclase MoaA Morganella morganii S1
5 group_142 EHELCC_03845 91187 91927 1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S2
6 group_1534 EHELCC_04385 206227 207210 -1 moaA GTP 3',8-cyclase MoaA Morganella morganii S2
7 group_870 EHELCC_06770 89125 90153 -1 epmB EF-P beta-lysylation protein EpmB Morganella morganii S2
8 group_1478 EHELCC_12745 27630 28097 1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S2
9 group_1373 EHELCC_13935 134052 135401 1 Uncharacterized radical SAM domain-containing protein Morganella morganii S2
10 group_142 NLDBIP_03845 90983 91723 1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S4
11 group_1534 NLDBIP_04385 206023 207006 -1 moaA GTP 3',8-cyclase MoaA Morganella morganii S4
12 group_870 NLDBIP_07095 88998 90026 -1 epmB EF-P beta-lysylation protein EpmB Morganella morganii S4
13 group_1478 NLDBIP_13085 27630 28097 1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S4
14 group_1373 NLDBIP_14380 154927 156276 1 Uncharacterized radical SAM domain-containing protein Morganella morganii S4
15 group_870 LHKJJB_06630 52744 53772 -1 epmB EF-P beta-lysylation protein EpmB Morganella morganii S3
16 group_1373 LHKJJB_08470 3473 4822 -1 Uncharacterized radical SAM domain-containing protein Morganella morganii S3
17 group_142 LHKJJB_09675 91097 91837 1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S3
18 group_1478 LHKJJB_13470 134346 134813 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S3
19 group_1534 LHKJJB_14245 128372 129355 1 moaA GTP 3',8-cyclase MoaA Morganella morganii S3
20 group_870 HKOGLL_04300 179615 180643 1 epmB EF-P beta-lysylation protein EpmB Morganella morganii S5
21 group_1373 HKOGLL_08020 3473 4822 -1 Uncharacterized radical SAM domain-containing protein Morganella morganii S5
22 group_142 HKOGLL_09300 99215 99955 -1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S5
23 group_1478 HKOGLL_11560 27630 28097 1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S5
24 group_1534 HKOGLL_12290 15043 16026 -1 moaA GTP 3',8-cyclase MoaA Morganella morganii S5
25 group_1534 F4V73_RS00760 159387 160370 1 moaA GTP 3',8-cyclase MoaA Morganella psychrotolerans
26 group_142 F4V73_RS01310 281993 282733 -1 pflA pyruvate formate lyase 1-activating protein Morganella psychrotolerans
27 group_1478 F4V73_RS09995 103694 104161 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella psychrotolerans
28 group_870 F4V73_RS11110 360091 361119 -1 epmB EF-P beta-lysylation protein EpmB Morganella psychrotolerans
29 group_1373 F4V73_RS12895 184787 186136 -1 radical SAM protein Morganella psychrotolerans
30 group_1534 PMI_RS03005 663808 664788 1 moaA GTP 3',8-cyclase MoaA Proteus mirabilis HI4320
31 group_142 PMI_RS03465 769220 769960 -1 pflA pyruvate formate lyase 1-activating protein Proteus mirabilis HI4320
32 group_2391 PMI_RS11095 2442252 2442923 -1 queE 7-carboxy-7-deazaguanine synthase QueE Proteus mirabilis HI4320
33 group_142 PMI_RS12405 2750872 2751738 1 YjjW family glycine radical enzyme activase Proteus mirabilis HI4320
34 group_870 PMI_RS12515 2775035 2776063 1 epmB EF-P beta-lysylation protein EpmB Proteus mirabilis HI4320
35 group_1478 PMI_RS17195 3777838 3778302 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Proteus mirabilis HI4320