Homologs in group_2778

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08105 FBDBKF_08105 100.0 Morganella morganii S1 - Uncharacterized radical SAM domain-containing protein
EHELCC_13935 EHELCC_13935 100.0 Morganella morganii S2 - Uncharacterized radical SAM domain-containing protein
NLDBIP_14380 NLDBIP_14380 100.0 Morganella morganii S4 - Uncharacterized radical SAM domain-containing protein
HKOGLL_08020 HKOGLL_08020 100.0 Morganella morganii S5 - Uncharacterized radical SAM domain-containing protein
F4V73_RS12895 F4V73_RS12895 87.1 Morganella psychrotolerans - radical SAM protein

Distribution of the homologs in the orthogroup group_2778

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2778

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q60332 3.24e-15 80 25 11 298 3 MJ0021 Putative glycyl-radical enzyme activating enzyme MJ0021 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_08470
Feature type CDS
Gene -
Product Uncharacterized radical SAM domain-containing protein
Location 3473 - 4822 (strand: -1)
Length 1350 (nucleotides) / 449 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2778
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04055 Radical SAM superfamily
PF13353 4Fe-4S single cluster domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2108 Function unknown (S) S Uncharacterized radical SAM domain-containing protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07129 uncharacterized protein - -

Protein Sequence

MIYPLTEQTPVLQHNAALQRYVRRYADIEKQTQQAIAQYGLSFESPYRRQAETDALRREVKALGAVFANNGKSIHSRWLSSACVQCRTGEGSYTTFLSLKCHRDCYFCFNPNQENYDGFQHEMRDAIGEVNAIAAEGYPLTHIALTGGEPLLFRQESIRFFETVQAKLPGVHTRLYTAGDPLDRNTALALAKAGLKEVRFSIKIDDPPEKIEKVLSRIALAREIFPDVMVEMPVIPGSEEQMYDLLLKLDAIGVDGINLLEFCFPLTNSPAYQERGFALKNPPYEVYYNYWYAGGLAVADSELACLRVLKFALGNQLSVGVHYCSLENKHTGQVYQSNAFISAEPYYLFSSRDYFFKSAKVFGEDCAAVAAALRKAGVPFREDLLHGFLQFSPESIMRLTDTPELPVLLTSHIAEADEQGNPLIKEVRVEFTTPAEFSPDDIHGGMCEQ

Flanking regions ( +/- flanking 50bp)

CAGTGATACCCGCCGGAGAGTTTCCGGCAGCGTACGTTAAGGAATCTTCTATGATTTACCCGCTGACAGAACAGACCCCGGTTTTACAGCATAATGCGGCGTTGCAGCGGTATGTCCGGCGTTATGCCGATATTGAAAAACAGACACAGCAGGCCATCGCACAGTACGGATTGTCTTTTGAATCGCCGTACCGGCGTCAGGCCGAAACGGACGCGCTGCGCCGTGAGGTGAAAGCACTGGGTGCGGTTTTTGCCAACAACGGTAAAAGCATCCACAGCCGCTGGCTGTCATCCGCCTGTGTGCAGTGCCGCACCGGTGAGGGCAGTTACACCACATTTTTATCCCTGAAATGTCACCGCGACTGTTATTTCTGCTTCAATCCGAATCAGGAAAATTACGACGGTTTTCAGCATGAGATGCGGGATGCCATTGGTGAGGTGAATGCGATTGCCGCAGAAGGGTATCCGCTCACCCATATTGCCCTGACCGGCGGCGAGCCGTTGTTGTTTCGTCAGGAGAGTATCCGCTTTTTTGAAACAGTGCAGGCGAAACTGCCCGGCGTTCATACCCGGCTGTACACCGCCGGTGATCCGCTGGATCGCAATACTGCGCTGGCACTGGCGAAAGCCGGTCTGAAAGAGGTGCGTTTCAGTATCAAAATTGATGATCCGCCGGAGAAAATTGAAAAGGTTCTCAGCCGGATAGCGCTGGCACGGGAGATTTTCCCGGATGTGATGGTGGAAATGCCGGTGATCCCGGGCAGCGAGGAGCAGATGTATGACCTGCTGCTGAAGCTGGATGCTATCGGCGTGGACGGCATCAATCTGCTGGAATTCTGTTTCCCGCTGACCAACAGCCCTGCCTATCAGGAACGGGGCTTTGCCCTGAAAAATCCCCCTTATGAAGTCTATTACAACTACTGGTACGCAGGCGGTCTGGCAGTGGCAGACAGCGAGCTGGCCTGTCTGCGGGTGCTGAAATTTGCCCTCGGAAATCAGCTTTCCGTTGGTGTGCATTACTGCTCACTGGAGAACAAACACACCGGCCAGGTGTATCAGAGTAATGCATTTATCAGCGCGGAGCCGTATTACCTGTTTTCTTCCCGTGATTACTTTTTCAAAAGCGCCAAGGTGTTCGGTGAGGACTGTGCTGCCGTCGCGGCAGCGTTGCGTAAGGCGGGTGTCCCGTTCCGTGAGGATCTCCTGCACGGTTTTTTACAATTCAGTCCTGAATCGATTATGCGCCTGACAGACACCCCTGAACTGCCTGTTCTGCTGACATCCCACATTGCGGAAGCCGATGAGCAGGGCAATCCCCTGATTAAAGAAGTGCGGGTGGAATTCACCACGCCCGCTGAATTTTCGCCCGACGATATCCACGGAGGTATGTGTGAACAGTGATAACCGGGATCCGGATTATCTGTATGCGCGTCAGTTTGCTTATGACGTCC