Orthogroup:group_1373


Homologs in group_1373

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08495 FBDBKF_08495 Morganella morganii S1 rpsF 30S ribosomal protein S6
EHELCC_13030 EHELCC_13030 Morganella morganii S2 rpsF 30S ribosomal protein S6
NLDBIP_13370 NLDBIP_13370 Morganella morganii S4 rpsF 30S ribosomal protein S6
LHKJJB_13185 LHKJJB_13185 Morganella morganii S3 rpsF 30S ribosomal protein S6
HKOGLL_11845 HKOGLL_11845 Morganella morganii S5 rpsF 30S ribosomal protein S6
F4V73_RS09715 F4V73_RS09715 Morganella psychrotolerans rpsF 30S ribosomal protein S6
PMI_RS16790 PMI_RS16790 Proteus mirabilis HI4320 rpsF 30S ribosomal protein S6

Distribution of group_1373 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1373 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1373

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1373.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsF 7

Product

# Product Occurence
1 30S ribosomal protein S6 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0360 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S6

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02990 7 small subunit ribosomal protein S6 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01250 7 Ribosomal protein S6

Annotations of the 515 SwissProt hits

Annotation Number of occurrences
Protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic 1
Small ribosomal subunit protein bS6 513
Small ribosomal subunit protein bS6c 1

Protein length

Min length 129
Max length 131
Mean length (sd) 129.3 (0.8)
Median length 129.0

Protein length distribution