Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S3 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Citrate cycle (TCA cycle) Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Citrate cycle (TCA cycle) pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K00024 | malate dehydrogenase [EC:1.1.1.37] | 0 | 0 |
| K00025 | malate dehydrogenase [EC:1.1.1.37] | 0 | 0 |
| K00026 | malate dehydrogenase [EC:1.1.1.37] | 0 | 0 |
| K00030 | isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] | 0 | 0 |
| K00031 | isocitrate dehydrogenase [EC:1.1.1.42] | 1 | 7 |
| K00116 | malate dehydrogenase (quinone) [EC:1.1.5.4] | 0 | 1 |
| K00161 | pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] | 0 | 0 |
| K00162 | pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] | 0 | 0 |
| K00163 | pyruvate dehydrogenase E1 component [EC:1.2.4.1] | 1 | 7 |
| K00164 | 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] | 1 | 7 |
| K00169 | pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] | 0 | 0 |
| K00170 | pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] | 0 | 0 |
| K00171 | pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] | 0 | 0 |
| K00172 | pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] | 0 | 0 |
| K00174 | 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] | 0 | 0 |
| K00175 | 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] | 0 | 0 |
| K00176 | 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] | 0 | 0 |
| K00177 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] | 0 | 0 |
| K00189 | 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] | 0 | 0 |
| K00233 | succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] | 0 | 0 |
| K00234 | succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1] | 0 | 0 |
| K00235 | succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1] | 0 | 0 |
| K00236 | succinate dehydrogenase (ubiquinone) cytochrome b560 subunit | 0 | 0 |
| K00237 | succinate dehydrogenase (ubiquinone) membrane anchor subunit | 0 | 0 |
| K00239 | succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] | 2 | 14 |
| K00240 | succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] | 1 | 7 |
| K00241 | succinate dehydrogenase cytochrome b subunit | 1 | 7 |
| K00242 | succinate dehydrogenase membrane anchor subunit | 1 | 7 |
| K00244 | succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] | 0 | 0 |
| K00245 | succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] | 1 | 7 |
| K00246 | succinate dehydrogenase subunit C | 1 | 7 |
| K00247 | succinate dehydrogenase subunit D | 1 | 7 |
| K00382 | dihydrolipoyl dehydrogenase [EC:1.8.1.4] | 1 | 7 |
| K00627 | pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] | 1 | 7 |
| K00658 | 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] | 1 | 7 |
| K01596 | phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] | 0 | 0 |
| K01610 | phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] | 1 | 7 |
| K01616 | multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] | 0 | 0 |
| K01647 | citrate synthase [EC:2.3.3.1] | 1 | 7 |
| K01648 | ATP citrate (pro-S)-lyase [EC:2.3.3.8] | 0 | 0 |
| K01675 | fumarate hydratase D [EC:4.2.1.2] | 0 | 0 |
| K01676 | fumarate hydratase, class I [EC:4.2.1.2] | 1 | 6 |
| K01677 | fumarate hydratase subunit alpha [EC:4.2.1.2] | 0 | 0 |
| K01678 | fumarate hydratase subunit beta [EC:4.2.1.2] | 0 | 0 |
| K01679 | fumarate hydratase, class II [EC:4.2.1.2] | 1 | 7 |
| K01681 | aconitate hydratase [EC:4.2.1.3] | 1 | 7 |
| K01682 | aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] | 1 | 7 |
| K01774 | fumarate hydratase E [EC:4.2.1.2] | 0 | 0 |
| K01899 | succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5] | 0 | 0 |
| K01900 | succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5] | 0 | 0 |
| K01902 | succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] | 1 | 7 |
| K01903 | succinyl-CoA synthetase beta subunit [EC:6.2.1.5] | 1 | 7 |
| K01958 | pyruvate carboxylase [EC:6.4.1.1] | 0 | 0 |
| K01959 | pyruvate carboxylase subunit A [EC:6.4.1.1] | 0 | 0 |
| K01960 | pyruvate carboxylase subunit B [EC:6.4.1.1] | 0 | 0 |
| K03737 | pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] | 1 | 5 |
| K05942 | citrate (Re)-synthase [EC:2.3.3.3] | 0 | 0 |
| K15230 | ATP-citrate lyase alpha-subunit [EC:2.3.3.8] | 0 | 0 |
| K15231 | ATP-citrate lyase beta-subunit [EC:2.3.3.8] | 0 | 0 |
| K17753 | isocitrate--homoisocitrate dehydrogenase [EC:1.1.1.286] | 0 | 0 |
| K18118 | succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] | 0 | 0 |
| K18859 | succinate dehydrogenase subunit D | 0 | 0 |
| K18860 | succinate dehydrogenase subunit D | 0 | 0 |
| K25801 | succinate dehydrogenase (ubiquinone) subunit 4 | 0 | 0 |
| K25995 | succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] | 0 | 0 |
| K25996 | succinate dehydrogenase subunit C | 0 | 0 |
| K26318 | fumarate reductase (cytochrome) [EC:1.3.2.4] | 0 | 0 |