K01676


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01676, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01676
KO K01676
Description fumarate hydratase, class I [EC:4.2.1.2]

KO part of 7 pathways

Citrate cycle (TCA cycle)
Pyruvate metabolism
Carbon fixation pathways in prokaryotes
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism

KO part of 3 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00173 Carbon fixation Reductive citrate cycle (Arnon-Buchanan cycle)

Occurence in the database

K01676 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3071 FBDBKF_18795 5859 7517 1 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Morganella morganii S1
1 group_3071 EHELCC_16990 5860 7518 1 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Morganella morganii S2
2 group_3071 NLDBIP_18370 5859 7517 1 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Morganella morganii S4
3 group_3071 LHKJJB_09255 184812 186470 -1 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Morganella morganii S3
4 group_3071 HKOGLL_08805 184812 186470 -1 ttdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Morganella morganii S5
5 group_3071 F4V73_RS13800 392549 394207 -1 fumarate hydratase Morganella psychrotolerans