K01647


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01647, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01647
KO K01647
Description citrate synthase [EC:2.3.3.1]

KO part of 8 pathways

Citrate cycle (TCA cycle)
Glyoxylate and dicarboxylate metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids

KO part of 4 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00010 Central carbohydrate metabolism Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00012 Other carbohydrate metabolism Glyoxylate cycle
M00740 Other carbohydrate metabolism Methylaspartate cycle

Occurence in the database

K01647 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1524 PMI_RS02775 608354 609637 -1 citrate synthase Proteus mirabilis HI4320
1 group_1524 FBDBKF_09845 65804 67099 1 gltA citrate synthase Morganella morganii S1
2 group_1524 EHELCC_04645 257769 259064 1 gltA citrate synthase Morganella morganii S2
3 group_1524 NLDBIP_04645 257565 258860 1 gltA citrate synthase Morganella morganii S4
4 group_1524 LHKJJB_13985 76518 77813 -1 gltA citrate synthase Morganella morganii S3
5 group_1524 HKOGLL_12550 66585 67880 1 gltA citrate synthase Morganella morganii S5
6 group_1524 F4V73_RS00500 105273 106559 -1 citrate synthase Morganella psychrotolerans