K01679
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K01679
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Description
External link |
K01679 |
KO |
K01679 |
Description |
fumarate hydratase, class II [EC:4.2.1.2] |
KO part of 10 pathways
KO part of 5 modules
M00009 |
Central carbohydrate metabolism |
Citrate cycle (TCA cycle, Krebs cycle) |
M00011 |
Central carbohydrate metabolism |
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate |
M00173 |
Carbon fixation |
Reductive citrate cycle (Arnon-Buchanan cycle) |
M00376 |
Carbon fixation |
3-Hydroxypropionate bi-cycle |
M00982 |
Other carbohydrate metabolism |
Methylcitrate cycle |
Occurence in the database
K01679 is associated with 7 different
proteins
|
The 7 proteins are classified into 1 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_987 |
FBDBKF_04990 |
1882 |
3276 |
-1 |
fumC |
class II fumarate hydratase |
Morganella morganii S1 |
1 |
group_987 |
EHELCC_12600 |
178218 |
179612 |
1 |
fumC |
class II fumarate hydratase |
Morganella morganii S2 |
2 |
group_987 |
NLDBIP_12940 |
178173 |
179567 |
1 |
fumC |
class II fumarate hydratase |
Morganella morganii S4 |
3 |
group_987 |
LHKJJB_12800 |
178218 |
179612 |
1 |
fumC |
class II fumarate hydratase |
Morganella morganii S3 |
4 |
group_987 |
HKOGLL_11415 |
178218 |
179612 |
1 |
fumC |
class II fumarate hydratase |
Morganella morganii S5 |
5 |
group_987 |
F4V73_RS05435 |
1154543 |
1155937 |
-1 |
fumC |
class II fumarate hydratase |
Morganella psychrotolerans |
6 |
group_987 |
PMI_RS06255 |
1369935 |
1371332 |
-1 |
fumC |
class II fumarate hydratase |
Proteus mirabilis HI4320 |