K01679


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K01679
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K01679
KO K01679
Description fumarate hydratase, class II [EC:4.2.1.2]

KO part of 10 pathways

Citrate cycle (TCA cycle)
Pyruvate metabolism
Other carbon fixation pathways
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Cushing syndrome
Pathways in cancer
Renal cell carcinoma

KO part of 5 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00173 Carbon fixation Reductive citrate cycle (Arnon-Buchanan cycle)
M00376 Carbon fixation 3-Hydroxypropionate bi-cycle
M00982 Other carbohydrate metabolism Methylcitrate cycle

Occurence in the database

K01679 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_987 FBDBKF_04990 1882 3276 -1 fumC class II fumarate hydratase Morganella morganii S1
1 group_987 EHELCC_12600 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S2
2 group_987 NLDBIP_12940 178173 179567 1 fumC class II fumarate hydratase Morganella morganii S4
3 group_987 LHKJJB_12800 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S3
4 group_987 HKOGLL_11415 178218 179612 1 fumC class II fumarate hydratase Morganella morganii S5
5 group_987 F4V73_RS05435 1154543 1155937 -1 fumC class II fumarate hydratase Morganella psychrotolerans
6 group_987 PMI_RS06255 1369935 1371332 -1 fumC class II fumarate hydratase Proteus mirabilis HI4320