K00241


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K00241
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K00241
KO K00241
Description succinate dehydrogenase cytochrome b subunit

KO part of 8 pathways

Citrate cycle (TCA cycle)
Oxidative phosphorylation
Butanoate metabolism
Other carbon fixation pathways
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism

KO part of 7 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00149 ATP synthesis Succinate dehydrogenase, prokaryotes
M00173 Carbon fixation Reductive citrate cycle (Arnon-Buchanan cycle)
M00374 Carbon fixation Dicarboxylate-hydroxybutyrate cycle
M00376 Carbon fixation 3-Hydroxypropionate bi-cycle
M00982 Other carbohydrate metabolism Methylcitrate cycle

Occurence in the database

K00241 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1572 FBDBKF_09840 64825 65214 -1 sdhC succinate dehydrogenase cytochrome b556 subunit Morganella morganii S1
1 group_1572 EHELCC_04640 256790 257179 -1 sdhC succinate dehydrogenase cytochrome b556 subunit Morganella morganii S2
2 group_1572 NLDBIP_04640 256586 256975 -1 sdhC succinate dehydrogenase cytochrome b556 subunit Morganella morganii S4
3 group_1572 LHKJJB_13990 78403 78792 1 sdhC succinate dehydrogenase cytochrome b556 subunit Morganella morganii S3
4 group_1572 HKOGLL_12545 65606 65995 -1 sdhC succinate dehydrogenase cytochrome b556 subunit Morganella morganii S5
5 group_1572 F4V73_RS00505 107217 107606 1 sdhC succinate dehydrogenase cytochrome b556 subunit Morganella psychrotolerans
6 group_1572 PMI_RS02780 610269 610649 1 sdhC succinate dehydrogenase cytochrome b556 subunit Proteus mirabilis HI4320