K00246


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K00246
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K00246
KO K00246
Description succinate dehydrogenase subunit C

KO part of 10 pathways

Citrate cycle (TCA cycle)
Oxidative phosphorylation
Pyruvate metabolism
Butanoate metabolism
Other carbon fixation pathways
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Two-component system

KO part of 4 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00150 ATP synthesis Fumarate reductase, prokaryotes
M00982 Other carbohydrate metabolism Methylcitrate cycle

Occurence in the database

K00246 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_850 FBDBKF_03610 128241 128633 1 frdC fumarate reductase subunit FrdC Morganella morganii S1
1 group_850 EHELCC_06925 118470 118862 -1 frdC fumarate reductase subunit FrdC Morganella morganii S2
2 group_850 NLDBIP_07250 118343 118735 -1 frdC fumarate reductase subunit FrdC Morganella morganii S4
3 group_850 LHKJJB_06785 82089 82481 -1 frdC fumarate reductase subunit FrdC Morganella morganii S3
4 group_850 HKOGLL_04145 150906 151298 1 frdC fumarate reductase subunit FrdC Morganella morganii S5
5 group_850 F4V73_RS11260 392157 392549 -1 frdC fumarate reductase subunit FrdC Morganella psychrotolerans
6 group_850 PMI_RS17840 3917374 3917769 -1 frdC fumarate reductase subunit FrdC Proteus mirabilis HI4320