K01903


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01903, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01903
KO K01903
Description succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

KO part of 8 pathways

Citrate cycle (TCA cycle)
Propanoate metabolism
C5-Branched dibasic acid metabolism
Carbon fixation pathways in prokaryotes
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism

KO part of 5 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00173 Carbon fixation Reductive citrate cycle (Arnon-Buchanan cycle)
M00374 Carbon fixation Dicarboxylate-hydroxybutyrate cycle
M00620 Carbon fixation Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate

Occurence in the database

K01903 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1517 PMI_RS02810 617977 619143 1 sucC ADP-forming succinate--CoA ligase subunit beta Proteus mirabilis HI4320
1 group_1517 FBDBKF_09810 56147 57313 -1 sucC ADP-forming succinate--CoA ligase subunit beta Morganella morganii S1
2 group_1517 EHELCC_04610 248112 249278 -1 sucC ADP-forming succinate--CoA ligase subunit beta Morganella morganii S2
3 group_1517 NLDBIP_04610 247908 249074 -1 sucC ADP-forming succinate--CoA ligase subunit beta Morganella morganii S4
4 group_1517 LHKJJB_14020 86304 87470 1 sucC ADP-forming succinate--CoA ligase subunit beta Morganella morganii S3
5 group_1517 HKOGLL_12515 56928 58094 -1 sucC ADP-forming succinate--CoA ligase subunit beta Morganella morganii S5
6 group_1517 F4V73_RS00535 115209 116375 1 sucC ADP-forming succinate--CoA ligase subunit beta Morganella psychrotolerans