K00245


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K00245
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K00245
KO K00245
Description succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]

KO part of 10 pathways

Citrate cycle (TCA cycle)
Oxidative phosphorylation
Pyruvate metabolism
Butanoate metabolism
Other carbon fixation pathways
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Two-component system

KO part of 4 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00150 ATP synthesis Fumarate reductase, prokaryotes
M00982 Other carbohydrate metabolism Methylcitrate cycle

Occurence in the database

K00245 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_849 FBDBKF_03605 127495 128229 1 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit Morganella morganii S1
1 group_849 EHELCC_06930 118874 119608 -1 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit Morganella morganii S2
2 group_849 NLDBIP_07255 118747 119481 -1 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit Morganella morganii S4
3 group_849 LHKJJB_06790 82493 83227 -1 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit Morganella morganii S3
4 group_849 HKOGLL_04140 150160 150894 1 frdB succinate dehydrogenase/fumarate reductase iron-sulfur subunit Morganella morganii S5
5 group_849 F4V73_RS11265 392561 393295 -1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit Morganella psychrotolerans
6 group_849 PMI_RS17845 3917784 3918521 -1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit Proteus mirabilis HI4320