K00245
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K00245
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Description
External link |
K00245 |
KO |
K00245 |
Description |
succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] |
KO part of 10 pathways
KO part of 4 modules
M00009 |
Central carbohydrate metabolism |
Citrate cycle (TCA cycle, Krebs cycle) |
M00011 |
Central carbohydrate metabolism |
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate |
M00150 |
ATP synthesis |
Fumarate reductase, prokaryotes |
M00982 |
Other carbohydrate metabolism |
Methylcitrate cycle |
Occurence in the database
K00245 is associated with 7 different
proteins
|
The 7 proteins are classified into 1 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_849 |
FBDBKF_03605 |
127495 |
128229 |
1 |
frdB |
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Morganella morganii S1 |
1 |
group_849 |
EHELCC_06930 |
118874 |
119608 |
-1 |
frdB |
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Morganella morganii S2 |
2 |
group_849 |
NLDBIP_07255 |
118747 |
119481 |
-1 |
frdB |
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Morganella morganii S4 |
3 |
group_849 |
LHKJJB_06790 |
82493 |
83227 |
-1 |
frdB |
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Morganella morganii S3 |
4 |
group_849 |
HKOGLL_04140 |
150160 |
150894 |
1 |
frdB |
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Morganella morganii S5 |
5 |
group_849 |
F4V73_RS11265 |
392561 |
393295 |
-1 |
|
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Morganella psychrotolerans |
6 |
group_849 |
PMI_RS17845 |
3917784 |
3918521 |
-1 |
|
succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
Proteus mirabilis HI4320 |