K00242


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00242, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00242
KO K00242
Description succinate dehydrogenase membrane anchor subunit

KO part of 8 pathways

Citrate cycle (TCA cycle)
Oxidative phosphorylation
Butanoate metabolism
Carbon fixation pathways in prokaryotes
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism

KO part of 4 modules

M00009 Central carbohydrate metabolism Citrate cycle (TCA cycle, Krebs cycle)
M00011 Central carbohydrate metabolism Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
M00149 ATP synthesis Succinate dehydrogenase, prokaryotes
M00173 Carbon fixation Reductive citrate cycle (Arnon-Buchanan cycle)

Occurence in the database

K00242 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1522 PMI_RS02785 610643 610987 1 sdhD succinate dehydrogenase membrane anchor subunit Proteus mirabilis HI4320
1 group_1522 FBDBKF_09835 64472 64831 -1 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein Morganella morganii S1
2 group_1522 EHELCC_04635 256437 256796 -1 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein Morganella morganii S2
3 group_1522 NLDBIP_04635 256233 256592 -1 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein Morganella morganii S4
4 group_1522 LHKJJB_13995 78786 79145 1 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein Morganella morganii S3
5 group_1522 HKOGLL_12540 65253 65612 -1 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein Morganella morganii S5
6 group_1522 F4V73_RS00510 107600 107959 1 sdhD succinate dehydrogenase membrane anchor subunit Morganella psychrotolerans