PF09335


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09335, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 36 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09335
Description VTT domain

Occurence in the database

PF09335 is associated with 36 different proteins (see tab "Protein list" and "Profile")
The 36 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_31 FBDBKF_03010 5722 6402 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S1
1 group_31 FBDBKF_06400 115027 115725 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S1
2 group_1351 FBDBKF_08375 50767 51276 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S1
3 group_31 FBDBKF_12515 19592 20143 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S1
4 group_1915 FBDBKF_14260 51694 52365 -1 dedA DedA family protein Morganella morganii S1
5 group_2218 FBDBKF_16950 18028 18498 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S1
6 group_31 EHELCC_07525 240701 241381 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S2
7 group_1915 EHELCC_08020 64620 65291 1 dedA DedA family protein Morganella morganii S2
8 group_31 EHELCC_09445 115599 116297 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S2
9 group_1351 EHELCC_13150 112449 112958 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S2
10 group_2218 EHELCC_16640 50012 50482 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S2
11 group_31 NLDBIP_07850 240574 241254 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S4
12 group_1915 NLDBIP_08345 64620 65291 1 dedA DedA family protein Morganella morganii S4
13 group_31 NLDBIP_09825 115599 116297 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S4
14 group_1351 NLDBIP_13490 112449 112958 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S4
15 group_2218 NLDBIP_16850 50012 50482 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S4
16 group_1915 LHKJJB_05920 191868 192539 -1 dedA DedA family protein Morganella morganii S3
17 group_31 LHKJJB_07385 204320 205000 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S3
18 group_31 LHKJJB_07930 100941 101639 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S3
19 group_1351 LHKJJB_13065 49485 49994 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S3
20 group_2218 LHKJJB_16620 18028 18498 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S3
21 group_31 HKOGLL_03545 28387 29067 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S5
22 group_1915 HKOGLL_04995 49211 49882 1 dedA DedA family protein Morganella morganii S5
23 group_31 HKOGLL_07480 100941 101639 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S5
24 group_1351 HKOGLL_11965 112449 112958 1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S5
25 group_2218 HKOGLL_17585 18028 18498 -1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family Morganella morganii S5
26 group_1915 F4V73_RS02650 558153 558824 1 DedA family protein Morganella psychrotolerans
27 group_1351 F4V73_RS09575 15493 16002 -1 VTT domain-containing protein Morganella psychrotolerans
28 group_31 F4V73_RS11905 533343 534026 -1 DedA family protein Morganella psychrotolerans
29 group_31 F4V73_RS15525 98326 99024 -1 DedA family protein Morganella psychrotolerans
30 group_2218 F4V73_RS18420 18176 18709 -1 DedA family protein Morganella psychrotolerans
31 group_31 PMI_RS00130 47778 48449 -1 DedA family protein Proteus mirabilis HI4320
32 group_1351 PMI_RS05140 1123218 1123730 -1 VTT domain-containing protein Proteus mirabilis HI4320
33 group_1915 PMI_RS08770 1918230 1918931 -1 DedA family protein Proteus mirabilis HI4320
34 group_2218 PMI_RS17565 3856221 3856751 1 DedA family protein Proteus mirabilis HI4320
35 group_31 PMI_RS18410 4037553 4038221 -1 DedA family protein Proteus mirabilis HI4320