Homologs in group_434

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06400 FBDBKF_06400 91.4 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_09445 EHELCC_09445 91.4 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_09825 NLDBIP_09825 91.4 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07930 LHKJJB_07930 91.4 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_07480 HKOGLL_07480 91.4 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
PMI_RS00130 PMI_RS00130 62.3 Proteus mirabilis HI4320 - DedA family protein

Distribution of the homologs in the orthogroup group_434

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_434

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA60 4.55e-95 280 63 0 197 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 4.55e-95 280 63 0 197 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 4.55e-95 280 63 0 197 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
P0A1F4 2.51e-87 260 59 0 213 3 yghB Inner membrane protein YghB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F5 2.51e-87 260 59 0 213 3 yghB Inner membrane protein YghB Salmonella typhi
P0AA66 2.83e-74 227 54 0 191 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 2.83e-74 227 54 0 191 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 2.83e-74 227 54 0 191 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 2.83e-74 227 54 0 191 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
A0A0H3H138 2.26e-23 96 31 3 194 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
P0ABP6 2.15e-21 91 31 3 192 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 2.15e-21 91 31 3 192 3 dedA Protein DedA Escherichia coli O157:H7
O69601 1.11e-18 84 32 4 165 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
P9WP09 6.85e-12 66 26 4 192 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 6.85e-12 66 26 4 192 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q55705 1.77e-11 64 26 4 192 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P57239 8.35e-11 63 29 3 144 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P30149 5.11e-10 61 32 3 140 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
Q8KA02 1.04e-09 60 30 4 146 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q2FVB8 7.38e-08 54 26 6 197 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
P63912 4.24e-07 52 27 7 228 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 4.24e-07 52 27 7 228 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 4.24e-07 52 27 7 228 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q89AV4 1.45e-06 51 27 3 141 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P33366 3.44e-06 49 31 6 132 1 yohD Inner membrane protein YohD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15525
Feature type CDS
Gene -
Product DedA family protein
Location 98326 - 99024 (strand: -1)
Length 699 (nucleotides) / 232 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000005
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_434
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

MHSLSEIVSALWSHDFAALSNPDVIWLVYAILFVVIVLENGVLPTAFLPGDTLLILSGALIAKGVMDFLPTLAILTAAAGLGSWLGFVQGRWLSDTKTVRRWMMQIPKNYHQKAEVLFNRHGLYALLIGRFLGFVRTLLPLLAGLSTLPNRRFQFFNWISGFLWVGIITTFGYVLNQIPFVKAHEKLVMTALLLIPVFFLIVGILASVYLFIRHYRRRRALLNRRHRRAKKK

Flanking regions ( +/- flanking 50bp)

CGATACACTATCTGTATTATTGTTCCGGATCTCGTTTTACAGGAAACCTCATGCATAGTTTATCCGAGATTGTGAGCGCGCTCTGGTCGCACGATTTCGCCGCCCTCTCCAACCCCGATGTTATCTGGCTGGTTTATGCCATTCTCTTTGTCGTGATTGTTCTGGAGAATGGCGTATTACCCACCGCCTTTTTACCCGGCGATACCCTGTTGATATTGTCCGGGGCGCTGATAGCCAAAGGTGTGATGGACTTTTTACCGACACTGGCGATTCTGACTGCCGCCGCCGGTCTGGGCAGTTGGCTCGGATTTGTGCAGGGGCGCTGGCTGAGTGATACGAAAACAGTCAGGCGCTGGATGATGCAAATCCCGAAAAATTATCACCAGAAAGCCGAAGTTTTGTTTAACCGCCACGGATTGTACGCCCTGCTGATTGGTCGTTTTCTCGGTTTTGTCCGCACACTGCTGCCGCTGCTCGCCGGGTTATCCACCCTGCCGAACCGCCGGTTTCAGTTTTTTAACTGGATCAGTGGATTTCTCTGGGTAGGCATCATTACAACATTTGGTTATGTGCTCAACCAGATCCCGTTTGTAAAAGCCCATGAAAAACTGGTGATGACAGCACTGCTGCTGATCCCTGTTTTTTTCCTGATTGTCGGTATTCTTGCCTCTGTGTATCTGTTCATCCGGCATTACCGCAGACGCCGTGCGCTGCTTAACCGCCGCCACCGGCGCGCGAAAAAGAAATGATTTGAAAGCTCCTGCGGGAGCTTTTTTTCTGCCTGTTTGTCAGCAAAGGT