Orthogroup:group_1953


Homologs in group_1953

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14655 FBDBKF_14655 Morganella morganii S1 ycfP alpha/beta hydrolase YcfP
EHELCC_15460 EHELCC_15460 Morganella morganii S2 ycfP alpha/beta hydrolase YcfP
NLDBIP_15990 NLDBIP_15990 Morganella morganii S4 ycfP alpha/beta hydrolase YcfP
LHKJJB_15850 LHKJJB_15850 Morganella morganii S3 ycfP alpha/beta hydrolase YcfP
HKOGLL_14970 HKOGLL_14970 Morganella morganii S5 ycfP alpha/beta hydrolase YcfP
F4V73_RS07450 F4V73_RS07450 Morganella psychrotolerans ycfP alpha/beta hydrolase YcfP
PMI_RS04290 PMI_RS04290 Proteus mirabilis HI4320 ycfP alpha/beta hydrolase YcfP

Distribution of group_1953 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1953 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1953

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1953.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ycfP 7

Product

# Product Occurence
1 alpha/beta hydrolase YcfP 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3150 7 R General function prediction only (R) Predicted esterase YcpF, UPF0227 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07000 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05728 7 Uncharacterised protein family (UPF0227)

Annotations of the 77 SwissProt hits

Annotation Number of occurrences
UPF0227 protein CKO_01948 1
UPF0227 protein ECA1814 1
UPF0227 protein Ent638_1623 1
UPF0227 protein KPK_3451 1
UPF0227 protein KPN78578_10770 1
UPF0227 protein NT01EI_1813 1
UPF0227 protein PBPRA2397 1
UPF0227 protein PC1_2487 1
UPF0227 protein PM0825 1
UPF0227 protein SO_2251 1
UPF0227 protein Sbal195_2522 1
UPF0227 protein Sbal223_1944 1
UPF0227 protein Sbal_2415 1
UPF0227 protein Shew185_2404 1
UPF0227 protein Shew_1627 1
UPF0227 protein Shewana3_2292 1
UPF0227 protein Shewmr4_1727 1
UPF0227 protein Shewmr7_1806 1
UPF0227 protein Spro_1925 1
UPF0227 protein Ssed_2836 1
UPF0227 protein Swoo_1808 1
UPF0227 protein VC0395_A1482/VC395_2007 1
UPF0227 protein VCM66_1816 1
UPF0227 protein VC_1892 1
UPF0227 protein VIBHAR_01524 1
UPF0227 protein VP0969 1
UPF0227 protein VS_2073 1
UPF0227 protein VV1_2072 1
UPF0227 protein VV2369 1
UPF0227 protein YE1706 1
UPF0227 protein YPA_1906 1
UPF0227 protein YPDSF_1831 1
UPF0227 protein YPK_1701 1
UPF0227 protein YPN_2013 1
UPF0227 protein YPO1616/y1776/YP_2238 1
UPF0227 protein YPTB2448 1
UPF0227 protein YPTS_2532 1
UPF0227 protein YcfP 38
UPF0227 protein YpAngola_A2819 1
UPF0227 protein YpsIP31758_1593 1

Protein length

Min length 181
Max length 182
Mean length (sd) 181.9 (0.4)
Median length 182.0

Protein length distribution