Homologs in group_1351

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08375 FBDBKF_08375 40.6 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_13150 EHELCC_13150 40.6 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_13490 NLDBIP_13490 40.6 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_13065 LHKJJB_13065 40.6 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_11965 HKOGLL_11965 40.6 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS09575 F4V73_RS09575 43.0 Morganella psychrotolerans - VTT domain-containing protein

Distribution of the homologs in the orthogroup group_1351

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1351

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O31453 2.04e-06 48 25 2 109 3 ybfM Uncharacterized membrane protein YbfM Bacillus subtilis (strain 168)
P30149 1.13e-05 47 28 4 112 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
Q9CHL6 3.65e-05 45 26 4 139 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. lactis (strain IL1403)
Q48630 0.000143 43 26 4 136 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. cremoris (strain MG1363)
Q8KA02 0.000229 43 25 2 139 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57239 0.000469 42 27 2 100 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P33366 0.000484 42 27 1 102 1 yohD Inner membrane protein YohD Escherichia coli (strain K12)
P63912 0.000522 42 25 5 136 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 0.000522 42 25 5 136 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 0.000522 42 25 5 136 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05140
Feature type CDS
Gene -
Product VTT domain-containing protein
Location 1123218 - 1123730 (strand: -1)
Length 513 (nucleotides) / 170 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1351
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Protein Sequence

MEILHSMLDTLSHVSPIALFFTITLLTAGKSTIGISSFLPPASLMLILIFGVCLPFHSPILLWLATSLGALLGSIVSYQLGRSIYYFPRLNKWVTRYQTKILRIQQLLKNKAFFILFISRFLAVFRYLTPFSAGLLKLPIYGIYLTSTVSALVWSGVFILIANGVISISL

Flanking regions ( +/- flanking 50bp)

AAAGATGCACTCTATACTAAAGGGGCAAAATATTATCAAAGGAGAATAAAATGGAGATACTCCATTCAATGCTTGACACATTAAGTCATGTTTCTCCTATCGCTTTATTTTTTACTATTACCCTGCTCACTGCGGGAAAATCTACTATTGGTATTTCATCCTTTTTACCTCCCGCATCGTTAATGCTGATCTTAATATTTGGGGTTTGCTTGCCCTTCCATTCGCCTATTTTACTTTGGTTAGCAACTAGTTTAGGTGCCTTATTAGGATCTATAGTGAGTTATCAGTTAGGGCGTTCCATTTATTATTTCCCTCGCTTAAATAAATGGGTTACCCGCTATCAAACAAAGATCTTACGTATACAACAACTGTTAAAAAATAAAGCATTCTTTATTCTTTTTATTTCACGCTTTTTAGCTGTGTTTCGCTACCTTACGCCTTTTAGCGCAGGTTTATTAAAACTCCCCATTTATGGTATTTATCTAACAAGTACTGTTTCAGCCTTAGTGTGGTCAGGAGTATTTATTTTAATAGCCAATGGCGTAATCTCCATCTCATTATAAAATAATAATTTTTAATTATTTATTATCTTTAATTGACTAATTTTGATATT