Homologs in group_31

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03010 FBDBKF_03010 55.9 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
FBDBKF_06400 FBDBKF_06400 61.0 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
FBDBKF_12515 FBDBKF_12515 23.4 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_07525 EHELCC_07525 55.9 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_09445 EHELCC_09445 61.0 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_07850 NLDBIP_07850 55.9 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_09825 NLDBIP_09825 61.0 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07385 LHKJJB_07385 55.9 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07930 LHKJJB_07930 61.0 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_03545 HKOGLL_03545 55.9 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_07480 HKOGLL_07480 61.0 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS11905 F4V73_RS11905 55.6 Morganella psychrotolerans - DedA family protein
F4V73_RS15525 F4V73_RS15525 62.3 Morganella psychrotolerans - DedA family protein
PMI_RS18410 PMI_RS18410 55.9 Proteus mirabilis HI4320 - DedA family protein

Distribution of the homologs in the orthogroup group_31

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_31

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1F4 2.05e-85 255 57 0 215 3 yghB Inner membrane protein YghB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F5 2.05e-85 255 57 0 215 3 yghB Inner membrane protein YghB Salmonella typhi
P0AA60 2.39e-85 255 58 0 197 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 2.39e-85 255 58 0 197 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 2.39e-85 255 58 0 197 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
P0AA66 1.67e-69 214 52 0 215 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 1.67e-69 214 52 0 215 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 1.67e-69 214 52 0 215 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 1.67e-69 214 52 0 215 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
A0A0H3H138 8.02e-22 92 27 3 204 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
P0ABP6 2.23e-18 83 27 2 189 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 2.23e-18 83 27 2 189 3 dedA Protein DedA Escherichia coli O157:H7
O69601 4.41e-16 77 30 5 172 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
Q55705 1.38e-10 62 28 3 158 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WP09 1.96e-10 62 27 6 194 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 1.96e-10 62 27 6 194 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q2FVB8 1.62e-08 56 28 4 142 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q8KA02 5.52e-08 55 28 2 135 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57239 3e-07 53 25 2 139 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
O31453 3.16e-07 52 23 3 152 3 ybfM Uncharacterized membrane protein YbfM Bacillus subtilis (strain 168)
P30149 2.34e-06 50 27 4 158 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
Q89AV4 4.27e-06 49 24 3 157 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P63912 5.24e-06 49 27 5 158 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 5.24e-06 49 27 5 158 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 5.24e-06 49 27 5 158 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q48630 7.2e-05 45 27 4 152 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. cremoris (strain MG1363)
Q9CHL6 0.000167 44 27 4 152 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. lactis (strain IL1403)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00130
Feature type CDS
Gene -
Product DedA family protein
Location 47778 - 48449 (strand: -1)
Length 672 (nucleotides) / 223 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_31
Orthogroup size 15
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

MGTLKEIIHALLQHDYMVLADPNILWIIYIVLFVIIMLENGVLPAAFLPGDTLLILCGALIAKDVLHFLPTIIVLGTAASIGSWLGFLQGRWLSDTKVVKRWMAQLPEQYHHKANDLFHRRGLYALLIGRFIGFVRTLLPTLAGLSELQQRRFQLFNWISGFLWVGLIVSLGYILNLIPFIQKHETLVMNILMTLPVLLLTAGLIGSIVMYIRHRKSSNNSAK

Flanking regions ( +/- flanking 50bp)

TTACGTTAGAATAGCTCTCATATAGTTTTTTTGTGATGCGAGTTCGCCGAATGGGTACATTAAAAGAGATAATTCACGCGCTACTGCAACATGATTATATGGTGCTAGCTGATCCAAATATTTTGTGGATTATTTATATTGTTCTTTTTGTTATTATTATGCTGGAAAATGGGGTTCTACCTGCCGCATTTCTACCCGGCGATACATTATTAATTCTCTGTGGTGCATTAATTGCCAAAGATGTTTTACATTTCTTGCCAACCATTATTGTGTTAGGTACTGCCGCGAGTATTGGTAGCTGGCTTGGCTTTCTGCAAGGCCGCTGGCTAAGTGATACTAAAGTGGTCAAACGTTGGATGGCTCAATTACCCGAACAATATCACCATAAAGCCAATGATCTTTTCCATCGTCGAGGCCTGTACGCACTATTAATTGGCCGTTTTATCGGTTTTGTACGTACATTACTACCAACTTTGGCCGGTTTATCTGAATTACAACAACGTCGCTTTCAACTATTTAACTGGATTAGTGGCTTCTTATGGGTCGGTCTTATTGTCTCATTAGGTTATATACTGAACCTGATCCCTTTTATTCAAAAACATGAAACATTGGTGATGAATATTCTTATGACATTACCAGTATTACTATTAACTGCCGGTTTAATTGGCTCTATTGTGATGTATATTCGTCATCGTAAAAGTAGCAATAACAGCGCCAAATAAGCCATTTCGAGTAACACCAAAAACGCCATTATTTAAAGTGAAAATAATGG