Homologs in group_2218

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16950 FBDBKF_16950 78.1 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_16640 EHELCC_16640 78.1 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_16850 NLDBIP_16850 78.1 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_16620 LHKJJB_16620 78.1 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_17585 HKOGLL_17585 78.1 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS18420 F4V73_RS18420 77.3 Morganella psychrotolerans - DedA family protein

Distribution of the homologs in the orthogroup group_2218

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2218

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30149 1.3e-27 107 34 0 152 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
P57239 1.9e-26 103 29 0 155 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AV4 1.04e-24 99 31 0 154 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8KA02 1.74e-23 96 30 0 147 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P63912 3.64e-10 60 31 3 148 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 3.64e-10 60 31 3 148 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 3.64e-10 60 31 3 148 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q2FVB8 5.89e-09 56 27 3 154 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
P0ABP6 1.07e-08 55 27 3 147 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 1.07e-08 55 27 3 147 3 dedA Protein DedA Escherichia coli O157:H7
A0A0H3H138 1.76e-08 55 27 3 147 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
P0AA60 2.82e-08 54 28 5 164 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 2.82e-08 54 28 5 164 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 2.82e-08 54 28 5 164 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
Q55705 2.31e-07 52 33 3 136 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P0AA66 2.76e-07 52 25 3 139 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 2.76e-07 52 25 3 139 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 2.76e-07 52 25 3 139 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 2.76e-07 52 25 3 139 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
Q49642 3.85e-07 51 29 2 141 3 ML0467 Uncharacterized membrane protein ML0467 Mycobacterium leprae (strain TN)
P33366 2.44e-06 48 30 3 139 1 yohD Inner membrane protein YohD Escherichia coli (strain K12)
O69601 0.000182 43 24 2 133 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17565
Feature type CDS
Gene -
Product DedA family protein
Location 3856221 - 3856751 (strand: 1)
Length 531 (nucleotides) / 176 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2218
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

MTVQDIIHTITLFVKEHEIWAVPIVFLLAFGESLAFISLLIPATVILLGLGALIGESGLLFWPIWLAAALGAFFGDWISYWVGYHYKEGVRNLWPISRSPQTLVRGHQFFNRWGVWGVFIGRFFGPFRAIVPLVAGICAMPQRYFQLANLASAMIWAFGILAPGAFGLQWLAKWIG

Flanking regions ( +/- flanking 50bp)

AAAGATGTTGTGCTTTTTTACTGAAATTAACCGAATTTAAGGTCTCTATTGTGACAGTACAAGACATTATCCATACCATCACTCTGTTTGTAAAAGAGCACGAAATATGGGCTGTGCCTATCGTGTTCTTACTGGCATTTGGTGAGTCACTTGCCTTTATCTCGTTATTAATACCTGCCACTGTTATCCTATTAGGCCTAGGAGCATTAATAGGTGAAAGTGGTCTACTCTTTTGGCCAATTTGGCTTGCTGCCGCCCTAGGCGCTTTTTTTGGTGATTGGATCTCCTATTGGGTGGGTTATCACTATAAAGAAGGGGTAAGAAACTTATGGCCGATTTCTCGCTCACCGCAGACCTTGGTAAGAGGGCATCAATTTTTTAATCGCTGGGGTGTTTGGGGGGTATTTATTGGGCGATTTTTTGGGCCTTTTCGGGCAATAGTGCCTTTAGTTGCGGGTATTTGTGCTATGCCACAACGCTATTTTCAGTTGGCGAATTTGGCTTCTGCGATGATCTGGGCATTTGGTATTCTGGCTCCAGGGGCGTTTGGCCTGCAATGGCTGGCGAAATGGATAGGATAATTGCGTCCTTTATCGCAAATCAGCGTATGATGTAAATTGTTGCTAGACAA