Homologs in group_208

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03010 FBDBKF_03010 76.0 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
FBDBKF_12515 FBDBKF_12515 29.4 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_07525 EHELCC_07525 76.0 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_07850 NLDBIP_07850 76.0 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07385 LHKJJB_07385 76.0 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_03545 HKOGLL_03545 76.0 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS11905 F4V73_RS11905 74.8 Morganella psychrotolerans - DedA family protein

Distribution of the homologs in the orthogroup group_208

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_208

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA66 2e-100 293 72 0 215 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 2e-100 293 72 0 215 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 2e-100 293 72 0 215 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 2e-100 293 72 0 215 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
P0AA60 1.45e-88 263 59 0 215 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 1.45e-88 263 59 0 215 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 1.45e-88 263 59 0 215 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
P0A1F4 5.07e-87 259 60 0 215 3 yghB Inner membrane protein YghB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F5 5.07e-87 259 60 0 215 3 yghB Inner membrane protein YghB Salmonella typhi
A0A0H3H138 3.74e-24 98 30 2 196 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
O69601 7.42e-22 92 35 2 168 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
P0ABP6 1.56e-19 86 28 2 188 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 1.56e-19 86 28 2 188 3 dedA Protein DedA Escherichia coli O157:H7
Q55705 2.73e-14 72 28 4 194 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WP09 7.85e-14 71 28 6 195 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 7.85e-14 71 28 6 195 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P33366 3.07e-08 55 30 3 143 1 yohD Inner membrane protein YohD Escherichia coli (strain K12)
Q8KA02 1.03e-07 54 29 2 143 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P63912 1.32e-07 53 26 6 215 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 1.32e-07 53 26 6 215 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 1.32e-07 53 26 6 215 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q89AV4 5.28e-07 52 25 4 168 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P30149 9.91e-07 51 32 3 131 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
Q49642 1.06e-06 51 25 5 189 3 ML0467 Uncharacterized membrane protein ML0467 Mycobacterium leprae (strain TN)
P57239 2.04e-06 50 25 2 132 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q48630 7.22e-06 48 26 3 151 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. cremoris (strain MG1363)
Q2FVB8 2.04e-05 47 26 3 155 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q9CHL6 3.77e-05 46 25 3 151 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. lactis (strain IL1403)
O31453 8.11e-05 45 22 2 131 3 ybfM Uncharacterized membrane protein YbfM Bacillus subtilis (strain 168)
O34908 0.000351 43 27 2 139 3 ykoX Uncharacterized membrane protein YkoX Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18410
Feature type CDS
Gene -
Product DedA family protein
Location 4037553 - 4038221 (strand: -1)
Length 669 (nucleotides) / 222 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_208
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

MEIVRELFLALWHQDYETLANPSLLWIIYILLFSILFLENGVLPAAFLPGDSLLILVGVLIAKGTMGFPLTLLILTAGASLGCWLGYLQGKWLGNTRLVRSWLSHLPEHYHQRAHGLFHRHGLAALLIGRFLAFVRTLLPTIAGLAGLQNGRFQVFNWLSGLLWVGILTTLGYLLGNSPLFRQYEHHLMNFLMLLPVCLLVIGLIGSVWVVIKKKSKQSNQP

Flanking regions ( +/- flanking 50bp)

AATGTTTTTGTATTTACCCCCGAATGACTCAGTTTTAGGAAGCCTTTTATATGGAAATCGTAAGAGAGCTGTTCTTGGCGCTTTGGCATCAAGATTACGAAACCTTAGCGAATCCCTCACTGCTTTGGATTATTTACATTTTATTATTCAGCATACTATTCCTAGAAAACGGAGTACTACCCGCAGCTTTCTTACCAGGAGACAGCTTATTAATTTTAGTGGGTGTGTTAATTGCTAAAGGAACCATGGGTTTTCCATTAACCTTACTTATTCTAACGGCAGGTGCTAGCTTAGGTTGTTGGCTGGGTTATCTGCAAGGGAAGTGGCTTGGTAACACCCGACTTGTACGAAGTTGGTTATCACATTTACCAGAACACTACCACCAACGAGCCCATGGACTTTTCCATCGACATGGCTTGGCAGCATTACTTATTGGTCGTTTTCTCGCTTTTGTTAGAACATTATTGCCGACTATTGCCGGCCTTGCTGGCTTACAAAACGGTCGTTTTCAAGTTTTTAATTGGCTAAGTGGTCTGTTATGGGTTGGTATTTTAACCACCTTAGGCTATTTATTAGGAAATAGTCCGTTATTCCGCCAATATGAGCATCATTTAATGAATTTTCTGATGCTACTGCCTGTTTGTTTATTAGTGATTGGCCTAATCGGGAGTGTATGGGTCGTCATTAAGAAGAAAAGTAAACAGAGTAATCAACCGTAATCTATCGCTATTTCTATTATTTTCTATAGCGTTAATATTTAGCATCTTAA