Homologs in group_2218

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16950 FBDBKF_16950 100.0 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_16640 EHELCC_16640 100.0 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_16850 NLDBIP_16850 100.0 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_17585 HKOGLL_17585 100.0 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS18420 F4V73_RS18420 82.1 Morganella psychrotolerans - DedA family protein
PMI_RS17565 PMI_RS17565 78.1 Proteus mirabilis HI4320 - DedA family protein

Distribution of the homologs in the orthogroup group_2218

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2218

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P57239 6.35e-24 96 31 0 133 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8KA02 2.01e-21 90 33 0 133 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AV4 1.5e-20 87 30 0 143 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P30149 1.68e-20 87 35 2 133 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
Q2FVB8 1.81e-11 62 29 3 154 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
P0AA60 1.39e-10 60 29 1 134 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 1.39e-10 60 29 1 134 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 1.39e-10 60 29 1 134 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
P0AA66 6.78e-09 55 26 1 142 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 6.78e-09 55 26 1 142 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 6.78e-09 55 26 1 142 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 6.78e-09 55 26 1 142 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
P63912 6.78e-08 53 28 2 132 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 6.78e-08 53 28 2 132 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 6.78e-08 53 28 2 132 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q55705 1.26e-07 52 33 3 136 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P0ABP6 4.16e-07 50 29 4 140 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 4.16e-07 50 29 4 140 3 dedA Protein DedA Escherichia coli O157:H7
Q49642 8.86e-07 50 28 3 145 3 ML0467 Uncharacterized membrane protein ML0467 Mycobacterium leprae (strain TN)
P0A1F4 1.88e-06 49 30 2 103 3 yghB Inner membrane protein YghB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F5 1.88e-06 49 30 2 103 3 yghB Inner membrane protein YghB Salmonella typhi
A0A0H3H138 6.9e-06 47 26 4 141 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
O69601 4.55e-05 45 25 3 151 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
P9WP09 0.000689 42 28 2 99 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 0.000689 42 28 2 99 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_16620
Feature type CDS
Gene dedA
Product Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
Location 18028 - 18498 (strand: -1)
Length 471 (nucleotides) / 156 (amino acids)

Contig

Accession ZDB_376
Length 68509 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2218
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

MPIVFVLAFGESLAFLSLLFPATVILLGVGALIGEGGLHFLPVFLAAAAGGFFGDWLSYYIGYYYKDNVRHMWPISRSPQTLVRGHQFFEKWGIWGVFFGRFFGPFRAVVPLVAGICAMPQRHFQLANLSSAVIWAFGLLAPGAFGLKWMAGLMGG

Flanking regions ( +/- flanking 50bp)

ATATTATCACCACCGTTACCGCATTTGTCCGTGAACATGAGATCTGGGCATTGCCGATCGTTTTCGTGCTGGCATTCGGTGAATCTCTCGCATTCCTTTCCCTGTTGTTTCCGGCAACAGTGATTCTGCTCGGAGTCGGGGCGCTGATCGGGGAAGGCGGGCTGCATTTTCTGCCGGTCTTCCTGGCAGCGGCCGCAGGTGGCTTTTTCGGTGACTGGCTCTCCTATTACATCGGCTACTACTACAAGGACAATGTCCGTCATATGTGGCCGATTTCCCGCTCGCCGCAAACCCTGGTCAGAGGGCATCAGTTCTTTGAAAAATGGGGAATATGGGGTGTCTTTTTCGGGCGCTTCTTCGGGCCGTTCCGTGCTGTGGTACCGCTGGTGGCAGGGATCTGTGCGATGCCGCAGCGCCATTTTCAGCTGGCGAACCTGTCTTCTGCCGTGATCTGGGCATTCGGCCTGCTGGCCCCCGGCGCGTTCGGGCTGAAATGGATGGCCGGGCTGATGGGCGGATAGCGCCGCATTTTCACCGGATTACATTGATTTTTGCGTGACGCGCCGAAAAA