Orthogroup:group_434



Homologs in group_434

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00385 FBDBKF_00385 Morganella morganii S1 rcsC two-component system sensor histidine kinase RcsC
EHELCC_01160 EHELCC_01160 Morganella morganii S2 rcsC two-component system sensor histidine kinase RcsC
NLDBIP_02300 NLDBIP_02300 Morganella morganii S4 rcsC two-component system sensor histidine kinase RcsC
LHKJJB_03815 LHKJJB_03815 Morganella morganii S3 rcsC two-component system sensor histidine kinase RcsC
HKOGLL_03230 HKOGLL_03230 Morganella morganii S5 rcsC two-component system sensor histidine kinase RcsC
F4V73_RS06365 F4V73_RS06365 Morganella psychrotolerans rcsC two-component system sensor histidine kinase RcsC
PMI_RS08495 PMI_RS08495 Proteus mirabilis HI4320 rcsC two-component system sensor histidine kinase RcsC

Distribution of group_434 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_434 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_434

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_434.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rcsC 7

Product

# Product Occurence
1 two-component system sensor histidine kinase RcsC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0642 7 T Signal transduction mechanisms (T) Signal transduction histidine kinase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07677 7 two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] Two-component system
Biofilm formation - Escherichia coli
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Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF00512 7 His Kinase A (phospho-acceptor) domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF09456 1 RcsC Alpha-Beta-Loop (ABL)

Annotations of the 603 SwissProt hits

Annotation Number of occurrences
Adaptive-response sensory kinase SasA 22
Adaptive-response sensory-kinase SasA 1
Adenylate cyclase 2 1
Aerobic respiration control protein ArcA homolog 1
Aerobic respiration control sensor protein ArcB 3
Aerobic respiration control sensor protein ArcB homolog 1
Alginate biosynthesis sensor protein KinB 1
Alkaline phosphatase synthesis sensor protein PhoR 1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Alkaline phosphatase synthesis transcriptional regulatory protein SphR 1
Autoinducer 1 sensor kinase/phosphatase LuxN 2
Autoinducer 2 sensor kinase/phosphatase LuxQ 5
Bacteriophytochrome 1
C4-dicarboxylate transport sensor protein DctB 1
C4-dicarboxylate transport sensor protein DctS 1
CAI-1 autoinducer sensor kinase/phosphatase CqsS 2
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Cell-division control histidine kinase PdhS 9
Chemotaxis protein CheY 10
Chemotaxis protein CheY homolog 3
Chemotaxis protein CheY-3 2
Chemotaxis protein CheY1 2
Circadian input-output histidine kinase CikA 3
Cyanobacterial phytochrome A 1
Cyanobacterial phytochrome B 1
Cyclic di-GMP phosphodiesterase PA4781 1
Cyclic di-GMP phosphodiesterase TM_0186 1
DNA-binding dual master transcriptional regulator RpaA 1
DNA-binding response regulator MtrA 6
Drug sensory protein A 1
Ethylene receptor 4
Ethylene receptor 1 6
Ethylene receptor 2 3
Ethylene receptor 3 2
Ethylene response sensor 1 1
Gliding motility regulatory protein 1
Globin-coupled histidine kinase 1
Heme response regulator HssR 17
Heme sensor protein HssS 16
Histidine kinase 1 1
Histidine kinase 2 1
Histidine kinase 3 1
Histidine kinase 4 1
Histidine kinase 5 1
Histidine kinase CKI1 1
Histidine kinase P4 1
Histidine protein kinase 1 1
Histidine protein kinase DivJ 1
Histidine protein kinase NIK1 1
Histidine protein kinase SLN1 1
Histidine protein kinase SaeS 12
Hybrid signal transduction histidine kinase A 1
Hybrid signal transduction histidine kinase B 1
Hybrid signal transduction histidine kinase C 1
Hybrid signal transduction histidine kinase D 1
Hybrid signal transduction histidine kinase E 1
Hybrid signal transduction histidine kinase F 1
Hybrid signal transduction histidine kinase G 1
Hybrid signal transduction histidine kinase H 1
Hybrid signal transduction histidine kinase I 1
Hybrid signal transduction histidine kinase J 1
Hybrid signal transduction histidine kinase K 1
Hybrid signal transduction histidine kinase L 1
Hybrid signal transduction histidine kinase M 1
Hybrid signal transduction protein dokA 1
Limited host range VirA protein 1
Methanogenesis regulatory histidine kinase FilI 1
Methyl sulfide methyltransferase-associated sensor 1
Nisin biosynthesis sensor protein NisK 1
Nodulation protein V 1
Non-motile and phage-resistance protein 1
Osmosensing histidine protein kinase SLN1 1
Peroxide stress-activated histidine kinase mak1 1
Peroxide stress-activated histidine kinase mak2 1
Peroxide stress-activated histidine kinase mak3 1
Phosphate regulon sensor protein PhoR 5
Phosphate regulon transcriptional regulatory protein PhoB 6
Phosphotransferase RcsD 1
Phytochrome 3
Phytochrome 1 3
Phytochrome 2 1
Phytochrome A 6
Phytochrome A type 3 1
Phytochrome A type 4 1
Phytochrome A1 1
Phytochrome B 5
Phytochrome B-2 1
Phytochrome B1 1
Phytochrome C 4
Phytochrome D 1
Phytochrome E 1
Phytochrome a 1
Phytochrome-like protein Cph1 1
Polar-differentiation response regulator DivK 9
Probable C4-dicarboxylate response regulator DctR 1
Probable chemotaxis protein CheY 1
Probable cyclic di-GMP phosphodiesterase VC_1348 1
Probable ethylene response sensor 1 2
Probable ethylene response sensor 2 2
Probable histidine kinase 1 2
Probable histidine kinase 2 2
Probable histidine kinase 3 2
Probable histidine kinase 4 1
Probable histidine kinase 5 1
Probable histidine kinase 6 1
Probable sensor histidine kinase TcrY 1
Probable sensor kinase SilS 1
Probable sensor protein PcoS 1
Probable transcriptional regulator ycf27 7
Probable transcriptional regulator ycf29 1
Probable transcriptional regulatory protein SYNPCC7002_A0851 1
Probable transcriptional regulatory protein SilR 1
Probable transcriptional regulatory protein TcrX 1
Protein EIN4 1
Protein PetR 1
Protein PilG 1
Protein PilH 1
Putative sensor protein Sfri_3689 1
Regulator of RpoS 3
Regulatory protein AtoC 1
Response regulator MprA 14
Response regulator PleD 2
Response regulator Rre1 1
Response regulator SaeR 10
Response regulator mcs4 1
Response regulator protein FleR 1
Response regulator protein PmrA 1
Sensor histidine kinase AruS 1
Sensor histidine kinase AtsR 1
Sensor histidine kinase CheAY 1
Sensor histidine kinase CpxA 2
Sensor histidine kinase CssS 1
Sensor histidine kinase CusS 3
Sensor histidine kinase EnvZ 6
Sensor histidine kinase GacS 1
Sensor histidine kinase GlrK 1
Sensor histidine kinase GtrS 1
Sensor histidine kinase Hik2 2
Sensor histidine kinase KdpD 1
Sensor histidine kinase MtrB 6
Sensor histidine kinase QseE 1
Sensor histidine kinase RcsC 4
Sensor histidine kinase ResE 1
Sensor histidine kinase RppB 1
Sensor histidine kinase SpaK 1
Sensor histidine kinase SsrA 1
Sensor histidine kinase TmoS 1
Sensor histidine kinase TodS 2
Sensor histidine kinase TrcS 1
Sensor histidine kinase WalK 1
Sensor histidine kinase YcbM 1
Sensor histidine kinase YclK 1
Sensor histidine kinase YkoH 1
Sensor histidine kinase YvrG 1
Sensor histidine kinase ZraS 5
Sensor histidine protein kinase/phosphatase WalK 2
Sensor protein BasS 2
Sensor protein ChvG 2
Sensor protein CiaH 2
Sensor protein CopS 1
Sensor protein CpxA 2
Sensor protein CreC 1
Sensor protein CseC 2
Sensor protein CzcS 1
Sensor protein DegM 1
Sensor protein DivL 1
Sensor protein DltS 2
Sensor protein EvgS 2
Sensor protein FixL 3
Sensor protein GacS 1
Sensor protein GtcS 1
Sensor protein IrlS 2
Sensor protein KdpD 5
Sensor protein PfeS 1
Sensor protein RprX 1
Sensor protein RstB 1
Sensor protein SphS 1
Sensor protein SrrB 8
Sensor protein TorS 2
Sensor protein VanS 1
Sensor protein VanSB 1
Sensor protein kinase PilS 1
Sensor protein kinase WalK 18
Sensor protein kinase WalK (Fragment) 2
Sensor-like histidine kinase SenX3 5
Sensor-type histidine kinase PrrB 4
Sensory histidine kinase/phosphatase NtrB 6
Sensory/regulatory protein RpfC 2
Signal transduction histidine-protein kinase AfsQ2 1
Signal transduction histidine-protein kinase ArlS 13
Signal transduction histidine-protein kinase AtoS 1
Signal transduction histidine-protein kinase BaeS 1
Signal transduction histidine-protein kinase BarA 4
Signal transduction histidine-protein kinase/phosphatase MprB 5
Sporulation initiation phosphotransferase F 1
Sporulation kinase A 1
Sporulation kinase B 1
Sporulation kinase C 1
Sporulation kinase D 1
Sporulation kinase E 1
Swarming motility regulation sensor protein RssA 1
Tetrathionate sensor histidine kinase TtrS 1
TorCAD operon transcriptional regulatory protein TorR 2
Transcription factor SKN7 2
Transcriptional activator protein CopR 1
Transcriptional activator protein CzcR 1
Transcriptional regulatory protein CiaR 2
Transcriptional regulatory protein CusR 3
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein KdpE 2
Transcriptional regulatory protein MalR 1
Transcriptional regulatory protein PdtaR 2
Transcriptional regulatory protein PhoP 3
Transcriptional regulatory protein PrrA 4
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein RprY 1
Transcriptional regulatory protein SrrA 8
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein WalR 8
Transcriptional regulatory protein YxdJ 1
Transcriptional regulatory protein ZraR 2
Two-component response regulator 24 1
Two-component response regulator ARR1 1
Two-component response regulator ARR11 1
Two-component response regulator ARR15 1
Two-component response regulator ARR16 1
Two-component response regulator ARR17 1
Two-component response regulator ARR22 1
Two-component response regulator ARR3 1
Two-component response regulator ARR4 1
Two-component response regulator ARR5 1
Two-component response regulator ARR6 1
Two-component response regulator ARR7 1
Two-component response regulator ARR8 1
Two-component response regulator ORR1 2
Two-component response regulator ORR10 2
Two-component response regulator ORR11 2
Two-component response regulator ORR12 1
Two-component response regulator ORR13 1
Two-component response regulator ORR2 2
Two-component response regulator ORR22 2
Two-component response regulator ORR23 2
Two-component response regulator ORR24 2
Two-component response regulator ORR26 1
Two-component response regulator ORR3 2
Two-component response regulator ORR41 1
Two-component response regulator ORR42 1
Two-component response regulator ORR5 2
Two-component response regulator ORR6 2
Two-component response regulator ORR7 1
Two-component response regulator ORR8 2
Two-component response regulator ORR9 2
Two-component response regulator PhoP 1
Two-component response regulator-like PRR95 1
Two-component sensor PprA 1
Two-component system protein A 1
Two-component system protein B 1
Uncharacterized 14.6 kDa protein in sodA1 3'region 1
Uncharacterized sensor-like histidine kinase R01002 1
Uncharacterized sensor-like histidine kinase ycf26 2
Uncharacterized transcriptional regulatory protein YcbL 1
Virulence sensor protein BvgS 3
Virulence transcriptional regulatory protein PhoP 8
Wide host range VirA protein 3

Protein length

Min length 942
Max length 949
Mean length (sd) 947.3 (2.4)
Median length 948.0

Protein length distribution