Homologs in group_31

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03010 FBDBKF_03010 91.6 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
FBDBKF_06400 FBDBKF_06400 52.4 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
FBDBKF_12515 FBDBKF_12515 27.5 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_07525 EHELCC_07525 91.6 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_09445 EHELCC_09445 52.4 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_07850 NLDBIP_07850 91.6 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_09825 NLDBIP_09825 52.4 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07385 LHKJJB_07385 91.6 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07930 LHKJJB_07930 52.4 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_03545 HKOGLL_03545 91.6 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_07480 HKOGLL_07480 52.4 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS15525 F4V73_RS15525 51.1 Morganella psychrotolerans - DedA family protein
PMI_RS00130 PMI_RS00130 55.6 Proteus mirabilis HI4320 - DedA family protein
PMI_RS18410 PMI_RS18410 74.8 Proteus mirabilis HI4320 - DedA family protein

Distribution of the homologs in the orthogroup group_31

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_31

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA66 3.8e-95 280 67 0 215 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 3.8e-95 280 67 0 215 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 3.8e-95 280 67 0 215 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 3.8e-95 280 67 0 215 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
P0A1F4 7.57e-86 256 59 0 215 3 yghB Inner membrane protein YghB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F5 7.57e-86 256 59 0 215 3 yghB Inner membrane protein YghB Salmonella typhi
P0AA60 1.1e-85 256 57 0 215 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 1.1e-85 256 57 0 215 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 1.1e-85 256 57 0 215 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
A0A0H3H138 3.75e-22 93 32 3 192 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
P0ABP6 2.66e-20 88 32 1 158 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 2.66e-20 88 32 1 158 3 dedA Protein DedA Escherichia coli O157:H7
O69601 2.89e-20 88 34 6 192 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
P9WP09 3.5e-13 69 29 5 193 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 3.5e-13 69 29 5 193 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q55705 5.92e-13 68 33 3 151 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P63912 8.65e-10 60 27 6 213 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 8.65e-10 60 27 6 213 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 8.65e-10 60 27 6 213 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8KA02 6.17e-09 58 30 2 133 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q49642 8.63e-09 57 25 6 218 3 ML0467 Uncharacterized membrane protein ML0467 Mycobacterium leprae (strain TN)
Q89AV4 1.78e-08 56 28 5 198 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q48630 3.3e-08 55 27 6 202 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. cremoris (strain MG1363)
P57239 7.56e-08 55 28 2 146 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q9CHL6 2.23e-07 53 27 2 148 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. lactis (strain IL1403)
P33366 3.04e-06 49 27 3 151 1 yohD Inner membrane protein YohD Escherichia coli (strain K12)
Q2FVB8 3.21e-06 49 25 4 195 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
P30149 1.22e-05 48 27 2 151 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
O31453 3.28e-05 46 22 2 150 3 ybfM Uncharacterized membrane protein YbfM Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11905
Feature type CDS
Gene -
Product DedA family protein
Location 533343 - 534026 (strand: -1)
Length 684 (nucleotides) / 227 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_31
Orthogroup size 15
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

METMQQLFFALWHQDYVTLSNPSLLWAIYIMLFAILFLENGLLPAAFLPGDSLLILVGVLIAKDTLDFPTTLIVLTAGASLGCWVGYLQGRWLSNTRMVQGWLSHLPPHYHQRAHGLFHRHGLAALLVGRFLAFIRTLLPMLAGIAGLSSRRFQFFNWLSGFLWVGILTSLGYCLGISPLFRKYEHYLMNILMIIPVVLLVCGLIASLWVVWRRKRTKNTDTDITPQ

Flanking regions ( +/- flanking 50bp)

GAACACACCCGATCGACGAAATAGGCCTACTTCAGTTTTAGGAATACTTGATGGAAACAATGCAGCAACTCTTTTTTGCACTTTGGCATCAGGATTATGTGACCCTGTCAAACCCATCTCTGTTATGGGCTATCTATATTATGCTGTTCGCCATCCTTTTTCTGGAAAATGGCCTGCTTCCTGCCGCCTTCTTACCCGGTGACAGCCTGCTCATCCTGGTCGGGGTATTAATCGCAAAAGATACGCTGGATTTTCCGACGACATTGATTGTTCTTACCGCCGGTGCCAGCCTGGGTTGCTGGGTCGGGTATCTGCAGGGGCGCTGGCTCAGTAATACGCGTATGGTACAAGGCTGGCTGTCACATTTGCCGCCTCATTATCACCAGCGCGCACACGGGTTATTTCACCGTCATGGTCTTGCCGCGCTGTTAGTCGGCCGCTTTCTTGCCTTTATCCGTACATTACTGCCGATGCTGGCGGGGATTGCGGGTCTGAGTTCCCGTCGTTTCCAGTTTTTTAACTGGCTGAGTGGTTTTCTCTGGGTCGGAATTTTAACCTCTCTCGGGTATTGCCTGGGCATCAGTCCGCTTTTCCGCAAGTATGAGCATTATCTGATGAATATTCTGATGATTATCCCGGTTGTCCTATTAGTCTGCGGGTTAATTGCCAGCCTGTGGGTTGTCTGGAGACGCAAGCGGACAAAAAATACCGATACGGATATCACCCCGCAATAAATCCTTTCCCGGTCTGTCGCTGAAATTGCGTAGACCGGGGAATATCATCC