Homologs in group_31

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03010 FBDBKF_03010 27.5 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
FBDBKF_06400 FBDBKF_06400 25.6 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_07525 EHELCC_07525 27.5 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_09445 EHELCC_09445 25.6 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_07850 NLDBIP_07850 27.5 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_09825 NLDBIP_09825 25.6 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07385 LHKJJB_07385 27.5 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_07930 LHKJJB_07930 25.6 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_03545 HKOGLL_03545 27.5 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_07480 HKOGLL_07480 25.6 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
F4V73_RS11905 F4V73_RS11905 27.5 Morganella psychrotolerans - DedA family protein
F4V73_RS15525 F4V73_RS15525 22.7 Morganella psychrotolerans - DedA family protein
PMI_RS00130 PMI_RS00130 23.4 Proteus mirabilis HI4320 - DedA family protein
PMI_RS18410 PMI_RS18410 25.7 Proteus mirabilis HI4320 - DedA family protein

Distribution of the homologs in the orthogroup group_31

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_31

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33366 2.13e-37 130 46 0 141 1 yohD Inner membrane protein YohD Escherichia coli (strain K12)
Q55705 6.64e-09 56 27 4 176 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O69601 5.66e-05 45 28 3 137 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
P9WP09 0.000238 43 32 3 113 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 0.000238 43 32 3 113 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0AA66 0.00065 42 26 4 129 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 0.00065 42 26 4 129 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 0.00065 42 26 4 129 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 0.00065 42 26 4 129 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12515
Feature type CDS
Gene dedA
Product Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
Location 19592 - 20143 (strand: 1)
Length 552 (nucleotides) / 183 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_31
Orthogroup size 15
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

METLLTHWITEYGYWATFFGTMIEGETAAFLSGIAAHHQLLSYPKVMLVAALGGIISDNVLFFTGYFAGNRILPRIHKHADKIARLQRIIHRRESLIIIGIRFAYGLRTIGPVIIGAAGINPLKFFVLNILGGALWGSVIVSAGYFISAAILALPLHTYLAWFLILAAVAGLFVLIRKHKFTL

Flanking regions ( +/- flanking 50bp)

TGGGATTATGTATTAATATCTCCGCCGGTTTATTTTAAACGGAGTGGCGGATGGAAACATTACTGACACACTGGATTACAGAATACGGCTATTGGGCAACCTTTTTCGGTACCATGATCGAAGGGGAAACCGCTGCATTTTTGTCCGGCATTGCTGCACACCATCAGTTATTATCCTATCCGAAAGTGATGCTGGTGGCCGCACTGGGCGGAATTATCAGTGACAATGTTCTGTTTTTTACCGGTTATTTTGCCGGAAACCGGATCCTTCCCCGCATTCATAAACATGCGGATAAAATAGCCCGTCTGCAACGGATAATTCACCGCCGTGAAAGCCTGATTATTATCGGAATACGTTTCGCTTACGGATTAAGGACTATCGGCCCCGTTATTATCGGCGCCGCCGGTATTAATCCGCTGAAATTTTTTGTGCTGAATATTCTCGGCGGAGCACTATGGGGAAGCGTTATTGTCTCTGCGGGGTATTTTATCAGCGCGGCAATCCTTGCCCTGCCGCTGCATACTTACCTTGCCTGGTTCCTTATCCTCGCGGCGGTTGCCGGTCTGTTTGTGCTGATAAGAAAGCATAAATTCACGCTGTAAACTGCGGAACAAACCCGCCCGTCAGCCACTATTCCGGCTTGCGGGCGCTG