PF00291

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00291
Protein list: lists the 67 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00291
Description Pyridoxal-phosphate dependent enzyme

Occurence in the database

PF00291 is associated with 67 different proteins
The 67 proteins are classified into 10 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_221 FBDBKF_00975 177110 177991 -1 cysM cysteine synthase CysM Morganella morganii S1
1 group_1016 FBDBKF_05175 42964 44154 1 trpB tryptophan synthase subunit beta Morganella morganii S1
2 group_1201 FBDBKF_06520 143426 144718 -1 thrC threonine synthase Morganella morganii S1
3 group_2789 FBDBKF_07765 73002 74204 -1 dpaL diaminopropionate ammonia-lyase Morganella morganii S1
4 group_475 FBDBKF_08180 10140 11708 1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S1
5 group_2858 FBDBKF_10525 63069 64088 -1 acd D-cysteine desulfhydrase Morganella morganii S1
6 group_1712 FBDBKF_11605 116385 117341 -1 cysK cysteine synthase A Morganella morganii S1
7 group_2946 FBDBKF_14390 78875 80209 -1 dsdA D-serine ammonia-lyase Morganella morganii S1
8 group_474 FBDBKF_15745 462 1448 1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB Morganella morganii S1
9 group_2965 FBDBKF_15915 33512 34552 -1 cysK Cysteine synthase Morganella morganii S1
10 group_221 EHELCC_00570 130877 131758 1 cysM cysteine synthase CysM Morganella morganii S2
11 group_2946 EHELCC_07890 36776 38110 1 dsdA D-serine ammonia-lyase Morganella morganii S2
12 group_1201 EHELCC_09565 143998 145290 -1 thrC threonine synthase Morganella morganii S2
13 group_1016 EHELCC_12415 137340 138530 -1 trpB tryptophan synthase subunit beta Morganella morganii S2
14 group_475 EHELCC_13345 152017 153585 -1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S2
15 group_2789 EHELCC_13595 47196 48398 -1 dpaL diaminopropionate ammonia-lyase Morganella morganii S2
16 group_2858 EHELCC_14860 63059 64078 -1 acd D-cysteine desulfhydrase Morganella morganii S2
17 group_1712 EHELCC_17525 14728 15684 -1 cysK cysteine synthase A Morganella morganii S2
18 group_474 EHELCC_17660 34391 35377 1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB Morganella morganii S2
19 group_2965 EHELCC_18515 20951 21991 -1 cysK Cysteine synthase Morganella morganii S2
20 group_221 NLDBIP_02890 548378 549259 -1 cysM cysteine synthase CysM Morganella morganii S4
21 group_2946 NLDBIP_08215 36776 38110 1 dsdA D-serine ammonia-lyase Morganella morganii S4
22 group_1201 NLDBIP_09945 143998 145290 -1 thrC threonine synthase Morganella morganii S4
23 group_1016 NLDBIP_12755 137295 138485 -1 trpB tryptophan synthase subunit beta Morganella morganii S4
24 group_475 NLDBIP_13685 152017 153585 -1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S4
25 group_2789 NLDBIP_14040 68071 69273 -1 dpaL diaminopropionate ammonia-lyase Morganella morganii S4
26 group_2858 NLDBIP_14690 63059 64078 -1 acd D-cysteine desulfhydrase Morganella morganii S4
27 group_2965 NLDBIP_17350 20951 21991 -1 cysK Cysteine synthase Morganella morganii S4
28 group_1712 NLDBIP_18735 15475 16431 -1 cysK cysteine synthase A Morganella morganii S4
29 group_474 NLDBIP_19330 10336 11322 1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB Morganella morganii S4
30 group_221 LHKJJB_04405 155619 156500 -1 cysM cysteine synthase CysM Morganella morganii S3
31 group_2946 LHKJJB_06050 219049 220383 -1 dsdA D-serine ammonia-lyase Morganella morganii S3
32 group_1201 LHKJJB_07810 71948 73240 1 thrC threonine synthase Morganella morganii S3
33 group_2789 LHKJJB_08810 90476 91678 1 dpaL diaminopropionate ammonia-lyase Morganella morganii S3
34 group_1016 LHKJJB_12615 137340 138530 -1 trpB tryptophan synthase subunit beta Morganella morganii S3
35 group_475 LHKJJB_12870 8858 10426 1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S3
36 group_2858 LHKJJB_14655 77648 78667 1 acd D-cysteine desulfhydrase Morganella morganii S3
37 group_2965 LHKJJB_17310 34197 35237 1 cysK Cysteine synthase Morganella morganii S3
38 group_1712 LHKJJB_17965 14728 15684 -1 cysK cysteine synthase A Morganella morganii S3
39 group_474 LHKJJB_18100 34391 35377 1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB Morganella morganii S3
40 group_221 HKOGLL_02640 131082 131963 1 cysM cysteine synthase CysM Morganella morganii S5
41 group_2946 HKOGLL_04865 21367 22701 1 dsdA D-serine ammonia-lyase Morganella morganii S5
42 group_1201 HKOGLL_07360 71948 73240 1 thrC threonine synthase Morganella morganii S5
43 group_2789 HKOGLL_08360 90476 91678 1 dpaL diaminopropionate ammonia-lyase Morganella morganii S5
44 group_1016 HKOGLL_11230 137340 138530 -1 trpB tryptophan synthase subunit beta Morganella morganii S5
45 group_475 HKOGLL_12160 152017 153585 -1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S5
46 group_2858 HKOGLL_13275 77648 78667 1 acd D-cysteine desulfhydrase Morganella morganii S5
47 group_2965 HKOGLL_17085 20951 21991 -1 cysK Cysteine synthase Morganella morganii S5
48 group_1712 HKOGLL_18685 8547 9503 1 cysK cysteine synthase A Morganella morganii S5
49 group_474 HKOGLL_18980 6677 7663 -1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB Morganella morganii S5
50 group_1016 F4V73_RS05630 1198193 1199383 1 trpB tryptophan synthase subunit beta Morganella psychrotolerans
51 group_221 F4V73_RS07050 1463570 1464451 -1 cysM cysteine synthase CysM Morganella psychrotolerans
52 group_474 F4V73_RS07945 1655608 1656594 -1 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB Morganella psychrotolerans
53 group_1712 F4V73_RS08075 1676771 1677727 1 cysK cysteine synthase A Morganella psychrotolerans
54 group_2789 F4V73_RS13280 283845 285044 1 dpaL diaminopropionate ammonia-lyase Morganella psychrotolerans
55 group_2858 F4V73_RS14235 65331 66353 -1 D-cysteine desulfhydrase Morganella psychrotolerans
56 group_1201 F4V73_RS15410 68850 70142 1 thrC threonine synthase Morganella psychrotolerans
57 group_2965 F4V73_RS16395 96007 97047 1 PLP-dependent cysteine synthase family protein Morganella psychrotolerans
58 group_475 F4V73_RS18710 9098 10663 1 ilvA threonine ammonia-lyase, biosynthetic Morganella psychrotolerans
59 group_1201 PMI_RS00015 3732 5024 1 thrC threonine synthase Proteus mirabilis HI4320
60 group_2946 PMI_RS00900 221530 222858 1 D-serine ammonia-lyase Proteus mirabilis HI4320
61 group_221 PMI_RS01140 281020 282036 1 cysteine synthase family protein Proteus mirabilis HI4320
62 group_474 PMI_RS05955 1307395 1308366 -1 threo-3-hydroxy-L-aspartate ammonia-lyase Proteus mirabilis HI4320
63 group_1016 PMI_RS06500 1426151 1427341 1 trpB tryptophan synthase subunit beta Proteus mirabilis HI4320
64 group_1712 PMI_RS09015 1964475 1965428 1 cysK cysteine synthase A Proteus mirabilis HI4320
65 group_221 PMI_RS09035 1968537 1969418 -1 cysM cysteine synthase CysM Proteus mirabilis HI4320
66 group_475 PMI_RS16420 3620735 3622309 1 ilvA threonine ammonia-lyase, biosynthetic Proteus mirabilis HI4320