Homologs in group_2765

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07765 FBDBKF_07765 100.0 Morganella morganii S1 dpaL diaminopropionate ammonia-lyase
NLDBIP_14040 NLDBIP_14040 100.0 Morganella morganii S4 dpaL diaminopropionate ammonia-lyase
LHKJJB_08810 LHKJJB_08810 100.0 Morganella morganii S3 dpaL diaminopropionate ammonia-lyase
HKOGLL_08360 HKOGLL_08360 100.0 Morganella morganii S5 dpaL diaminopropionate ammonia-lyase
F4V73_RS13280 F4V73_RS13280 95.2 Morganella psychrotolerans dpaL diaminopropionate ammonia-lyase

Distribution of the homologs in the orthogroup group_2765

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2765

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P66899 0.0 645 76 1 395 1 ygeX Diaminopropionate ammonia-lyase Escherichia coli (strain K12)
P66900 0.0 645 76 1 395 3 ygeX Diaminopropionate ammonia-lyase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P66901 0.0 645 76 1 395 3 ygeX Diaminopropionate ammonia-lyase Escherichia coli O157:H7
P40817 8.38e-124 367 47 4 400 1 dpaL Diaminopropionate ammonia-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5ZNC1 2.13e-11 68 27 9 259 3 dsdA Probable D-serine dehydratase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
B3PYT5 8.35e-11 67 28 9 257 3 dsdA Probable D-serine dehydratase Rhizobium etli (strain CIAT 652)
P20506 6.61e-09 61 26 6 176 3 ilvA L-Threonine dehydratase biosynthetic IlvA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8CNK9 2.12e-08 59 21 10 293 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HMF5 2.12e-08 59 21 10 293 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P04968 3.75e-08 58 26 6 176 1 ilvA L-threonine dehydratase biosynthetic IlvA Escherichia coli (strain K12)
Q04G28 7.73e-08 57 23 9 301 3 dsdA Probable D-serine dehydratase Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
Q8NWQ4 1.34e-07 56 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain MW2)
Q6G9C4 1.34e-07 56 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain MSSA476)
Q6GGX0 1.34e-07 56 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain MRSA252)
Q5HFY5 1.34e-07 56 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain COL)
Q2FYJ3 1.34e-07 56 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FH01 1.34e-07 56 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain USA300)
P46493 2.39e-07 56 27 7 180 3 ilvA L-threonine dehydratase biosynthetic IlvA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A6UB95 2.95e-07 55 24 4 212 3 dsdA Probable D-serine dehydratase Sinorhizobium medicae (strain WSM419)
Q9CKJ2 4.09e-07 55 24 13 312 3 ilvA L-threonine dehydratase biosynthetic IlvA Pasteurella multocida (strain Pm70)
Q2YY67 4.51e-07 55 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q04513 9.31e-07 54 26 6 207 3 ilvA L-threonine dehydratase biosynthetic IlvA Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q86B06 2.29e-06 52 23 8 279 3 sds L-serine dehydratase Dictyostelium discoideum
Q7A5L8 3.32e-06 52 31 5 145 1 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain N315)
Q99U50 3.32e-06 52 31 5 145 3 tdcB L-threonine dehydratase catabolic TdcB Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q49Z16 1.07e-05 50 23 9 234 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
C8ZAU6 1.14e-05 50 22 15 366 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse)
B3LU13 1.14e-05 50 22 15 366 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain RM11-1a)
P0CF23 1.54e-05 50 21 14 366 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae
Q9AXU4 3.08e-05 49 25 11 241 1 TD Threonine dehydratase Nicotiana attenuata
B5VKE8 3.24e-05 49 22 14 359 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain AWRI1631)
Q4L7U4 3.58e-05 49 21 7 231 3 ilvA L-threonine dehydratase biosynthetic IlvA Staphylococcus haemolyticus (strain JCSC1435)
Q74FW6 4.47e-05 48 30 0 72 1 tdcB L-threonine ammonia-lyase Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
A6ZVB1 4.62e-05 48 22 15 366 3 SDL1 L-serine dehydratase Saccharomyces cerevisiae (strain YJM789)
P25306 4.63e-05 49 22 6 201 1 TD2 Threonine dehydratase 2 biosynthetic, chloroplastic Solanum lycopersicum
Q9ZSS6 6.78e-05 48 27 7 178 1 OMR1 Threonine dehydratase biosynthetic, chloroplastic Arabidopsis thaliana
P55664 0.000123 47 25 6 182 3 NGR_a01490 Putative threonine dehydratase Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P37887 0.000151 47 36 1 77 1 cysK Cysteine synthase Bacillus subtilis (strain 168)
O59701 0.000202 46 32 1 86 1 cys11 Cysteine synthase 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P9WG95 0.000237 46 25 7 179 1 ilvA L-threonine dehydratase biosynthetic IlvA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG94 0.000237 46 25 7 179 3 ilvA L-threonine dehydratase biosynthetic IlvA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66898 0.000237 46 25 7 179 3 ilvA L-threonine dehydratase biosynthetic IlvA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O94634 0.000388 46 38 0 49 3 SPBC1677.03c Threonine dehydratase, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A0FKE6 0.000432 46 27 7 179 1 TD1 Threonine dehydratase 1 biosynthetic, chloroplastic Solanum lycopersicum
Q8CMT6 0.000474 45 26 4 156 3 cysK Cysteine synthase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HRP1 0.000474 45 26 4 156 3 cysK Cysteine synthase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q2PGG3 0.000519 45 22 9 261 1 SR Serine racemase Arabidopsis thaliana
A4F2N8 0.000524 45 23 3 159 1 thadh L-threo-3-hydroxyaspartate ammonia-lyase Pseudomonas sp.
Q7M9S1 0.000696 45 25 7 213 3 trpB1 Tryptophan synthase beta chain 1 Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W)
O59791 0.000843 44 28 0 71 1 sry1 Serine racemase Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_13595
Feature type CDS
Gene dpaL
Product diaminopropionate ammonia-lyase
Location 47196 - 48398 (strand: -1)
Length 1203 (nucleotides) / 400 (amino acids)

Contig

Accession ZDB_223
Length 138954 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2765
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00291 Pyridoxal-phosphate dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1171 Amino acid transport and metabolism (E) E Threonine deaminase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01751 diaminopropionate ammonia-lyase [EC:4.3.1.15] - -

Protein Sequence

MSVFSLKLDISDNRYFNGKHSPLFSREEAHKALKFHEKITGYHPTPLYDMKDLAALFGVRNILVKDESQRFDLNAFKILGGSYAIAHLLCEKYNMDINDFSFEKLKSTLTEKMTFATTTDGNHGRGVAWAARALGQKAVVYMPKGSAQERVNHITGLGAECIVTDMNYDDTVRLTMENAKKHGWIVVQDTACEGYTKIPTWIMQGYTTLAAEAVAQMKEMKIQRPTHVLLQAGVGAMAGGVLGYLVDEFGAKDLHSIIVEPDLADCLYRSSLKGEIVNVGGDMATIMAGLACGEPNPIGWDLMRNCATQFISCEDAVAALGMRVLGNPYGKDSRVISGESGAVGLGVLAAVNYHPERAELMARLGLNSDSVILVINTEGDTDTKHYREVVWEGKNPAQKY

Flanking regions ( +/- flanking 50bp)

CCGGCCGTCGCCGGCCGGGTTCTTTTCCCGATGATATGAGGTGAGGCTCTATGTCTGTCTTCTCACTGAAGTTAGATATTTCAGATAACCGTTATTTCAACGGTAAACACTCCCCGCTTTTTTCCCGTGAAGAAGCACATAAGGCGCTGAAGTTTCATGAGAAAATTACGGGTTACCATCCGACACCACTGTATGACATGAAAGATCTCGCCGCGCTGTTCGGCGTGCGTAATATCCTGGTGAAAGATGAGTCACAGCGTTTTGATCTGAATGCATTCAAAATTCTGGGCGGCTCTTATGCTATCGCCCACCTGTTGTGCGAAAAGTACAACATGGATATTAACGATTTCTCTTTCGAGAAACTCAAAAGCACTCTGACTGAAAAAATGACGTTCGCCACCACCACTGACGGTAACCACGGCCGCGGTGTGGCCTGGGCGGCACGCGCACTCGGTCAGAAAGCGGTGGTGTACATGCCGAAAGGCTCCGCACAGGAACGTGTGAATCACATTACCGGCCTCGGGGCGGAGTGTATCGTCACAGATATGAACTACGACGATACCGTCCGTCTCACCATGGAAAATGCCAAAAAACACGGCTGGATCGTGGTTCAGGATACCGCCTGCGAAGGATACACCAAGATCCCGACCTGGATTATGCAGGGCTACACCACACTGGCTGCCGAAGCGGTTGCCCAGATGAAAGAGATGAAGATTCAGCGTCCGACCCACGTGCTGTTACAGGCCGGTGTGGGTGCGATGGCCGGCGGTGTGCTGGGCTATCTGGTCGATGAGTTCGGGGCAAAAGATCTGCATTCCATTATTGTCGAGCCGGATCTGGCTGACTGTCTCTACCGTTCCAGCCTGAAAGGCGAAATCGTCAATGTCGGCGGCGATATGGCCACCATCATGGCGGGTCTGGCCTGCGGCGAGCCGAACCCTATCGGCTGGGATCTGATGCGTAACTGCGCGACACAGTTTATCTCCTGTGAAGATGCGGTGGCTGCCCTCGGCATGCGTGTCCTCGGTAACCCGTACGGCAAAGACAGCCGCGTGATTTCCGGTGAATCCGGCGCGGTCGGTCTCGGTGTGCTGGCTGCGGTTAACTATCATCCGGAACGTGCGGAACTGATGGCAAGACTCGGCCTGAACAGTGATTCCGTCATCCTCGTGATCAACACCGAAGGTGACACAGATACCAAACATTACCGTGAAGTTGTCTGGGAAGGTAAAAACCCGGCGCAGAAATATTAACTAATTGGAGTATTGAAATATGGCTAAGCAAATCCCGTTTGATGAAATTG