Orthogroup:group_2838


Homologs in group_2838

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10525 FBDBKF_10525 Morganella morganii S1 acd D-cysteine desulfhydrase
EHELCC_14860 EHELCC_14860 Morganella morganii S2 acd D-cysteine desulfhydrase
NLDBIP_14690 NLDBIP_14690 Morganella morganii S4 acd D-cysteine desulfhydrase
LHKJJB_14655 LHKJJB_14655 Morganella morganii S3 acd D-cysteine desulfhydrase
HKOGLL_13275 HKOGLL_13275 Morganella morganii S5 acd D-cysteine desulfhydrase
F4V73_RS14235 F4V73_RS14235 Morganella psychrotolerans - D-cysteine desulfhydrase

Distribution of group_2838 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2838 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2838

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2838.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acd 5
2 - 1

Product

# Product Occurence
1 D-cysteine desulfhydrase 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2515 6 E Amino acid transport and metabolism (E) 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00291 6 Pyridoxal-phosphate dependent enzyme

Annotations of the 106 SwissProt hits

Annotation Number of occurrences
1-aminocyclopropane-1-carboxylate deaminase 47
Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial 1
D-cysteine desulfhydrase 45
D-cysteine desulfhydrase 1, mitochondrial 1
D-cysteine desulfhydrase 2, mitochondrial 1
L-cysteate sulfo-lyase 2
Nocardicin C-9' epimerase 1
Probable 1-aminocyclopropane-1-carboxylate deaminase 2
Putative 1-aminocyclopropane-1-carboxylate deaminase 4
Putative D-cysteine desulfhydrase 2, mitochondrial 1
Threonine dehydratase 1

Protein length

Min length 339
Max length 340
Mean length (sd) 339.2 (0.4)
Median length 339.0

Protein length distribution