Orthogroup:group_229



Homologs in group_229

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00975 FBDBKF_00975 Morganella morganii S1 cysM cysteine synthase CysM
EHELCC_00570 EHELCC_00570 Morganella morganii S2 cysM cysteine synthase CysM
NLDBIP_02890 NLDBIP_02890 Morganella morganii S4 cysM cysteine synthase CysM
LHKJJB_04405 LHKJJB_04405 Morganella morganii S3 cysM cysteine synthase CysM
HKOGLL_02640 HKOGLL_02640 Morganella morganii S5 cysM cysteine synthase CysM
F4V73_RS07050 F4V73_RS07050 Morganella psychrotolerans cysM cysteine synthase CysM
PMI_RS01140 PMI_RS01140 Proteus mirabilis HI4320 - cysteine synthase family protein
PMI_RS09035 PMI_RS09035 Proteus mirabilis HI4320 cysM cysteine synthase CysM

Distribution of group_229 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_229 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_229

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_229.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cysM 7
2 - 1

Product

# Product Occurence
1 cysteine synthase CysM 7
2 cysteine synthase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0031 8 E Amino acid transport and metabolism (E) Cysteine synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12339 7 S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] Cysteine and methionine metabolism
Metabolic pathways
Biosynthesis of amino acids
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00291 8 Pyridoxal-phosphate dependent enzyme

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG044286 1 cysteine synthase family protein VF1252 Nutritional/Metabolic factor

Annotations of the 192 SwissProt hits

Annotation Number of occurrences
2-amino-4-ketopentanoate thiolase beta subunit 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 1
Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial 1
Bifunctional cystathionine gamma-lyase/cysteine synthase 1
Catabolic L-serine/threonine dehydratase 1
Cystathionine beta-synthase 8
Cystathionine beta-synthase cbs-1 1
Cysteine synthase 30
Cysteine synthase (Fragment) 1
Cysteine synthase 1 5
Cysteine synthase 2 3
Cysteine synthase 3 1
Cysteine synthase A 4
Cysteine synthase B 4
Cysteine synthase B (Fragment) 1
Cysteine synthase, chloroplastic/chromoplastic 4
Cysteine synthase, mitochondrial 1
L-3-cyanoalanine synthase 1, mitochondrial 1
L-3-cyanoalanine synthase 2, mitochondrial 1
L-Threonine dehydratase biosynthetic IlvA 1
L-cysteate sulfo-lyase 1
L-cysteine desulfhydrase Cds1 2
L-serine dehydratase 5
L-threo-3-hydroxyaspartate ammonia-lyase 2
L-threonine ammonia-lyase 2
L-threonine dehydratase biosynthetic IlvA 7
L-threonine dehydratase catabolic TdcB 9
N-(2-amino-2-carboxyethyl)-L-glutamate synthase 20
O-acetylserine dependent cystathionine beta-synthase 1
O-acetylserine sulfhydrylase 4
O-phosphoserine sulfhydrylase 3
O-ureido-L-serine synthase 1
Phenylserine dehydratase 1
Probable cystathionine beta-synthase Rv1077 1
Probable cysteine synthase 1
Protein CysO 1
Putative cystathionine beta-synthase MT1108 1
Putative cystathionine beta-synthase cbs-2 1
Putative cysteine synthase 1
Putative inactive cysteine synthase 2 1
Putative mitochondrial cysteine synthase 1
Putative pyridoxal-phosphate dependent protein F13B12.4 1
S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent), chloroplastic 1
S-sulfocysteine synthase 1
Serine dehydratase-like 1
Serine racemase 9
Threonine dehydratase 1
Threonine dehydratase 1 biosynthetic, chloroplastic 1
Threonine dehydratase 2 biosynthetic, chloroplastic 1
Threonine dehydratase biosynthetic, chloroplastic 2
Threonine dehydratase, mitochondrial 1
Threonine dehydratase-like protein AKTS1-1 1
Threonine synthase 11
Tryptophan synthase beta chain 18
beta-hydroxyaspartate dehydratase 1

Protein length

Min length 293
Max length 338
Mean length (sd) 298.6 (15.9)
Median length 293.0

Protein length distribution